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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-11 23:40:22 UTC

Update Date

2021-09-26 23:18:05 UTC

HMDB ID

HMDB0260136

Secondary Accession Numbers

None

Metabolite Identification

Common Name

(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid

Description

(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid, also known as 1-(2-{[hydroxy(pyrrolidin-2-yl)methylidene]amino}acetyl)pyrrolidine-2-carboxylate, belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Based on a literature review very few articles have been published on (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). (2s)-1-[2-[[(2s)-pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0260136
     RDKit          3D
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic...
 38 39  0  0  0  0  0  0  0  0999 V2000
    1.5194   -0.1135   -1.2765 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7865    0.0391   -0.0379 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8517   -0.2126    0.9761 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4753   -0.6627    0.6549 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1037    0.3860   -0.1987 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4909    1.4382   -0.5199 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4231    0.2030   -0.6651 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1528    1.1329   -1.4961 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4192    0.4360   -1.9101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0731   -1.0220   -1.6915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2716   -0.9386   -0.3959 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1252   -0.7407    0.7788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9213   -1.6304    1.1528 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0582    0.4456    1.4945 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1507    0.5011    0.2796 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9593   -0.5679    1.0149 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3252    0.1272    0.9915 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3001    0.8672   -0.3132 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9727    0.7086   -0.8736 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1087   -0.0765    1.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3520   -1.6039    0.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0928   -0.8725    1.5421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6054    1.3912   -2.4322 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3773    2.0622   -0.9040 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6672    0.6539   -2.9693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2604    0.7357   -1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9573   -1.6613   -1.6003 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3663   -1.3162   -2.4833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719   -1.8844   -0.3152 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8021    0.3539    2.4808 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1568    1.3958    0.9012 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6003   -0.7588    2.0200 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0242   -1.4314    0.3538 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1458   -0.5882    1.0868 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2865    0.8440    1.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0897    0.5059   -1.0266 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4691    1.9638   -0.2018 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9203   -0.1098   -1.5252 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  2 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 11  7  1  0
 19 15  1  0
  3 20  1  0
  4 21  1  0
  4 22  1  0
  8 23  1  0
  8 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
 11 29  1  0
 14 30  1  0
 15 31  1  0
 16 32  1  0
 16 33  1  0
 17 34  1  0
 17 35  1  0
 18 36  1  0
 18 37  1  0
 19 38  1  0
M  END


  Mrv1652309122101402D          

 19 20  0  0  0  0            999 V2000
   -1.9922   -2.7148    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4402   -2.1017    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6865   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7727   -3.2578    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5797   -3.4293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0280   -2.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0280   -1.1998    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7425   -2.4373    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4569   -2.0248    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1714   -2.4373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1714   -3.2623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8859   -2.0248    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.9721   -1.2043    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7791   -1.0328    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1916   -1.7472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6396   -2.3603    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8111   -3.1673    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5957   -3.4222    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1980   -3.7193    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  1  5  1  0  0  0  0
  3  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 12 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0260136

> <DATABASE_NAME>
hmdb

> <SMILES>
OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1

> <INCHI_IDENTIFIER>
InChI=1S/C12H19N3O4/c16-10(15-6-2-4-9(15)12(18)19)7-14-11(17)8-3-1-5-13-8/h8-9,13H,1-7H2,(H,14,17)(H,18,19)

> <INCHI_KEY>
BRPMXFSTKXXNHF-UHFFFAOYSA-N

> <FORMULA>
C12H19N3O4

> <MOLECULAR_WEIGHT>
269.301

> <EXACT_MASS>
269.137556104

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
38

> <JCHEM_AVERAGE_POLARIZABILITY>
27.021765966358636

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
1-{2-[(pyrrolidin-2-yl)formamido]acetyl}pyrrolidine-2-carboxylic acid

> <ALOGPS_LOGP>
-2.58

> <JCHEM_LOGP>
-3.9385947752245642

> <ALOGPS_LOGS>
-1.57

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.67967361823181

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.3420446197728872

> <JCHEM_PKA_STRONGEST_BASIC>
9.504491702522484

> <JCHEM_POLAR_SURFACE_AREA>
98.74000000000001

> <JCHEM_REFRACTIVITY>
65.85430000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.20e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1-[2-(pyrrolidin-2-ylformamido)acetyl]pyrrolidine-2-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0260136
     RDKit          3D
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic...
 38 39  0  0  0  0  0  0  0  0999 V2000
    1.5194   -0.1135   -1.2765 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7865    0.0391   -0.0379 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8517   -0.2126    0.9761 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4753   -0.6627    0.6549 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1037    0.3860   -0.1987 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4909    1.4382   -0.5199 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4231    0.2030   -0.6651 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1528    1.1329   -1.4961 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4192    0.4360   -1.9101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0731   -1.0220   -1.6915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2716   -0.9386   -0.3959 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1252   -0.7407    0.7788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9213   -1.6304    1.1528 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0582    0.4456    1.4945 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1507    0.5011    0.2796 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9593   -0.5679    1.0149 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3252    0.1272    0.9915 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3001    0.8672   -0.3132 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9727    0.7086   -0.8736 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1087   -0.0765    1.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3520   -1.6039    0.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0928   -0.8725    1.5421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6054    1.3912   -2.4322 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3773    2.0622   -0.9040 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6672    0.6539   -2.9693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2604    0.7357   -1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9573   -1.6613   -1.6003 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3663   -1.3162   -2.4833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719   -1.8844   -0.3152 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8021    0.3539    2.4808 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1568    1.3958    0.9012 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6003   -0.7588    2.0200 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0242   -1.4314    0.3538 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1458   -0.5882    1.0868 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2865    0.8440    1.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0897    0.5059   -1.0266 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4691    1.9638   -0.2018 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9203   -0.1098   -1.5252 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  2 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 11  7  1  0
 19 15  1  0
  3 20  1  0
  4 21  1  0
  4 22  1  0
  8 23  1  0
  8 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
 11 29  1  0
 14 30  1  0
 15 31  1  0
 16 32  1  0
 16 33  1  0
 17 34  1  0
 17 35  1  0
 18 36  1  0
 18 37  1  0
 19 38  1  0
M  END

HEADER    PROTEIN                                 12-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   12-SEP-21         0                                  
HETATM    1  C   UNK     0      -3.719  -5.068   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -2.688  -3.923   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.281  -4.550   0.000  0.00  0.00           C+0
HETATM    4  N   UNK     0      -1.442  -6.081   0.000  0.00  0.00           N+0
HETATM    5  C   UNK     0      -2.949  -6.401   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.052  -3.780   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       0.052  -2.240   0.000  0.00  0.00           O+0
HETATM    8  N   UNK     0       1.386  -4.550   0.000  0.00  0.00           N+0
HETATM    9  C   UNK     0       2.720  -3.780   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.053  -4.550   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       4.053  -6.090   0.000  0.00  0.00           O+0
HETATM   12  N   UNK     0       5.387  -3.780   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       5.548  -2.248   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.054  -1.928   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.824  -3.262   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.794  -4.406   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.114  -5.912   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       8.579  -6.388   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       5.970  -6.943   0.000  0.00  0.00           O+0
CONECT    1    2    5                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4    6                                                  
CONECT    4    3    5                                                       
CONECT    5    4    1                                                       
CONECT    6    3    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   16                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   12   17                                                  
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17                                                            
MASTER        0    0    0    0    0    0    0    0   19    0   40    0
END

COMPND    HMDB0260136
HETATM    1  O1  UNL     1       1.519  -0.113  -1.277  1.00  0.00           O  
HETATM    2  C1  UNL     1       1.786   0.039  -0.038  1.00  0.00           C  
HETATM    3  N1  UNL     1       0.852  -0.213   0.976  1.00  0.00           N  
HETATM    4  C2  UNL     1      -0.475  -0.663   0.655  1.00  0.00           C  
HETATM    5  C3  UNL     1      -1.104   0.386  -0.199  1.00  0.00           C  
HETATM    6  O2  UNL     1      -0.491   1.438  -0.520  1.00  0.00           O  
HETATM    7  N2  UNL     1      -2.423   0.203  -0.665  1.00  0.00           N  
HETATM    8  C4  UNL     1      -3.153   1.133  -1.496  1.00  0.00           C  
HETATM    9  C5  UNL     1      -4.419   0.436  -1.910  1.00  0.00           C  
HETATM   10  C6  UNL     1      -4.073  -1.022  -1.692  1.00  0.00           C  
HETATM   11  C7  UNL     1      -3.272  -0.939  -0.396  1.00  0.00           C  
HETATM   12  C8  UNL     1      -4.125  -0.741   0.779  1.00  0.00           C  
HETATM   13  O3  UNL     1      -4.921  -1.630   1.153  1.00  0.00           O  
HETATM   14  O4  UNL     1      -4.058   0.446   1.494  1.00  0.00           O  
HETATM   15  C9  UNL     1       3.151   0.501   0.280  1.00  0.00           C  
HETATM   16  C10 UNL     1       3.959  -0.568   1.015  1.00  0.00           C  
HETATM   17  C11 UNL     1       5.325   0.127   0.992  1.00  0.00           C  
HETATM   18  C12 UNL     1       5.300   0.867  -0.313  1.00  0.00           C  
HETATM   19  N3  UNL     1       3.973   0.709  -0.874  1.00  0.00           N  
HETATM   20  H1  UNL     1       1.109  -0.077   1.964  1.00  0.00           H  
HETATM   21  H2  UNL     1      -0.352  -1.604   0.045  1.00  0.00           H  
HETATM   22  H3  UNL     1      -1.093  -0.872   1.542  1.00  0.00           H  
HETATM   23  H4  UNL     1      -2.605   1.391  -2.432  1.00  0.00           H  
HETATM   24  H5  UNL     1      -3.377   2.062  -0.904  1.00  0.00           H  
HETATM   25  H6  UNL     1      -4.667   0.654  -2.969  1.00  0.00           H  
HETATM   26  H7  UNL     1      -5.260   0.736  -1.232  1.00  0.00           H  
HETATM   27  H8  UNL     1      -4.957  -1.661  -1.600  1.00  0.00           H  
HETATM   28  H9  UNL     1      -3.366  -1.316  -2.483  1.00  0.00           H  
HETATM   29  H10 UNL     1      -2.672  -1.884  -0.315  1.00  0.00           H  
HETATM   30  H11 UNL     1      -3.802   0.354   2.481  1.00  0.00           H  
HETATM   31  H12 UNL     1       3.157   1.396   0.901  1.00  0.00           H  
HETATM   32  H13 UNL     1       3.600  -0.759   2.020  1.00  0.00           H  
HETATM   33  H14 UNL     1       4.024  -1.431   0.354  1.00  0.00           H  
HETATM   34  H15 UNL     1       6.146  -0.588   1.087  1.00  0.00           H  
HETATM   35  H16 UNL     1       5.286   0.844   1.864  1.00  0.00           H  
HETATM   36  H17 UNL     1       6.090   0.506  -1.027  1.00  0.00           H  
HETATM   37  H18 UNL     1       5.469   1.964  -0.202  1.00  0.00           H  
HETATM   38  H19 UNL     1       3.920  -0.110  -1.525  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3   15
CONECT    3    4   20
CONECT    4    5   21   22
CONECT    5    6    6    7
CONECT    7    8   11
CONECT    8    9   23   24
CONECT    9   10   25   26
CONECT   10   11   27   28
CONECT   11   12   29
CONECT   12   13   13   14
CONECT   14   30
CONECT   15   16   19   31
CONECT   16   17   32   33
CONECT   17   18   34   35
CONECT   18   19   36   37
CONECT   19   38
END

HMDB0260136
     RDKit          3D
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic...
 38 39  0  0  0  0  0  0  0  0999 V2000
    1.5194   -0.1135   -1.2765 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7865    0.0391   -0.0379 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8517   -0.2126    0.9761 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4753   -0.6627    0.6549 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1037    0.3860   -0.1987 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4909    1.4382   -0.5199 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4231    0.2030   -0.6651 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1528    1.1329   -1.4961 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4192    0.4360   -1.9101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0731   -1.0220   -1.6915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2716   -0.9386   -0.3959 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1252   -0.7407    0.7788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9213   -1.6304    1.1528 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0582    0.4456    1.4945 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1507    0.5011    0.2796 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9593   -0.5679    1.0149 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3252    0.1272    0.9915 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3001    0.8672   -0.3132 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9727    0.7086   -0.8736 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1087   -0.0765    1.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3520   -1.6039    0.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0928   -0.8725    1.5421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6054    1.3912   -2.4322 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3773    2.0622   -0.9040 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6672    0.6539   -2.9693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2604    0.7357   -1.2319 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9573   -1.6613   -1.6003 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3663   -1.3162   -2.4833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6719   -1.8844   -0.3152 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8021    0.3539    2.4808 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1568    1.3958    0.9012 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6003   -0.7588    2.0200 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0242   -1.4314    0.3538 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1458   -0.5882    1.0868 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2865    0.8440    1.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0897    0.5059   -1.0266 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4691    1.9638   -0.2018 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9203   -0.1098   -1.5252 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
  2 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 11  7  1  0
 19 15  1  0
  3 20  1  0
  4 21  1  0
  4 22  1  0
  8 23  1  0
  8 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
 11 29  1  0
 14 30  1  0
 15 31  1  0
 16 32  1  0
 16 33  1  0
 17 34  1  0
 17 35  1  0
 18 36  1  0
 18 37  1  0
 19 38  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Value	Source
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylate	Generator
1-(2-{[hydroxy(pyrrolidin-2-yl)methylidene]amino}acetyl)pyrrolidine-2-carboxylate	HMDB

Chemical Formula

C₁₂H₁₉N₃O₄

Average Molecular Weight

269.301

Monoisotopic Molecular Weight

269.137556104

IUPAC Name

1-{2-[(pyrrolidin-2-yl)formamido]acetyl}pyrrolidine-2-carboxylic acid

Traditional Name

1-[2-(pyrrolidin-2-ylformamido)acetyl]pyrrolidine-2-carboxylic acid

CAS Registry Number

Not Available

SMILES

OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1

InChI Identifier

InChI=1S/C12H19N3O4/c16-10(15-6-2-4-9(15)12(18)19)7-14-11(17)8-3-1-5-13-8/h8-9,13H,1-7H2,(H,14,17)(H,18,19)

InChI Key

BRPMXFSTKXXNHF-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Amino acids, peptides, and analogues

Direct Parent

Oligopeptides

Alternative Parents

Substituents

Alpha-oligopeptide
Proline or derivatives
N-acyl-alpha-amino acid
N-acyl-alpha amino acid or derivatives
Alpha-amino acid amide
Alpha-amino acid or derivatives
N-acylpyrrolidine
Pyrrolidine carboxylic acid
Pyrrolidine-2-carboxamide
Pyrrolidine carboxylic acid or derivatives
Tertiary carboxylic acid amide
Pyrrolidine
Amino acid or derivatives
Carboxamide group
Amino acid
Secondary carboxylic acid amide
Carboxylic acid
Secondary aliphatic amine
Monocarboxylic acid or derivatives
Azacycle
Organoheterocyclic compound
Secondary amine
Organic oxygen compound
Organic nitrogen compound
Organic oxide
Hydrocarbon derivative
Amine
Organopnictogen compound
Organonitrogen compound
Organooxygen compound
Carbonyl group
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31557052)

Source

Exogenous

Exogenous (PMID: 31557052)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	-2.6	ALOGPS
logP	-3.9	ChemAxon
logS	-1.6	ALOGPS
pKa (Strongest Acidic)	3.34	ChemAxon
pKa (Strongest Basic)	9.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	98.74 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	65.85 m³·mol⁻¹	ChemAxon
Polarizability	27.02 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	160.849	32859911
AllCCS	[M+H-H2O]+	157.359	32859911
AllCCS	[M+Na]+	165.017	32859911
AllCCS	[M+NH4]+	164.086	32859911
AllCCS	[M-H]-	163.458	32859911
AllCCS	[M+Na-2H]-	163.166	32859911
AllCCS	[M+HCOO]-	162.959	32859911
DeepCCS	[M+H]+	153.507	30932474
DeepCCS	[M-H]-	151.149	30932474
DeepCCS	[M-2H]-	184.202	30932474
DeepCCS	[M+Na]+	159.6	30932474

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.	2.11 minutes	32390414
Predicted by Siyang on May 30, 2022	9.3059 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	6.51 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	732.9 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	214.0 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	91.8 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	159.4 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	53.5 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	231.1 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	271.5 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	767.9 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	574.2 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	86.3 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	842.0 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	184.6 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	192.0 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	668.9 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	426.8 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	261.3 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid	OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1	3448.0	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid	OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1	2311.6	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid	OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1	2542.6	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #1	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1)[Si](C)(C)C	2553.1	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #1	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1)[Si](C)(C)C	2480.3	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #1	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1)[Si](C)(C)C	3496.3	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #2	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1[Si](C)(C)C	2554.2	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #2	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1[Si](C)(C)C	2511.2	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #2	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1[Si](C)(C)C	3424.6	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #3	C[Si](C)(C)N(CC(=O)N1CCCC1C(=O)O)C(=O)C1CCCN1[Si](C)(C)C	2496.6	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #3	C[Si](C)(C)N(CC(=O)N1CCCC1C(=O)O)C(=O)C1CCCN1[Si](C)(C)C	2524.1	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TMS,isomer #3	C[Si](C)(C)N(CC(=O)N1CCCC1C(=O)O)C(=O)C1CCCN1[Si](C)(C)C	3372.8	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,3TMS,isomer #1	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1[Si](C)(C)C)[Si](C)(C)C	2522.9	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,3TMS,isomer #1	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1[Si](C)(C)C)[Si](C)(C)C	2553.7	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,3TMS,isomer #1	C[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1[Si](C)(C)C)[Si](C)(C)C	3044.0	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1)[Si](C)(C)C(C)(C)C	3027.2	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1)[Si](C)(C)C(C)(C)C	2912.5	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1)[Si](C)(C)C(C)(C)C	3507.5	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1[Si](C)(C)C(C)(C)C	3032.6	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1[Si](C)(C)C(C)(C)C	2939.0	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CNC(=O)C1CCCN1[Si](C)(C)C(C)(C)C	3536.9	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CC(=O)N1CCCC1C(=O)O)C(=O)C1CCCN1[Si](C)(C)C(C)(C)C	3006.0	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CC(=O)N1CCCC1C(=O)O)C(=O)C1CCCN1[Si](C)(C)C(C)(C)C	2949.3	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(CC(=O)N1CCCC1C(=O)O)C(=O)C1CCCN1[Si](C)(C)C(C)(C)C	3514.5	Standard polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3212.9	Semi standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3151.7	Standard non polar	33892256
(2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OC(=O)C1CCCN1C(=O)CN(C(=O)C1CCCN1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3322.2	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (Non-derivatized) - 70eV, Positive	splash10-00fr-9420000000-cd1f4a23710284f2e9bb	2021-09-23	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (TBDMS_1_1) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (TBDMS_1_2) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid GC-MS (TBDMS_1_3) - 70eV, Positive	Not Available	2021-11-05	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-10-27	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	31557052	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

15039581

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

20455010

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Showing metabocard for (2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid (HMDB0260136)

MOL for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

3D MOL for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

3D SDF for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

3D-SDF for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

PDB for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

3D PDB for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

SMILES for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

INCHI for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

Structure for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

3D Structure for HMDB0260136 ((2S)-1-[2-[[(2S)-Pyrrolidine-2-carbonyl]amino]acetyl]pyrrolidine-2-carboxylic Acid)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

NMR Spectra