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Record Information

Version

5.0

Status

Predicted

Creation Date

2021-09-16 04:08:22 UTC

Update Date

2022-11-30 20:07:11 UTC

HMDB ID

HMDB0290470

Secondary Accession Numbers

None

Metabolite Identification

Common Name

SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))

Description

SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) is a type of oxidized sphingolipid found in animal cell membranes. It usually consists of phosphorylcholine and ceramide. SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) consists of a sphingosine backbone and a Leukotriene B4 chain. In humans, sphingomyelin is the only membrane phospholipid not derived from glycerol. Like all sphingolipids, SM has a ceramide core (sphingosine bonded to a fatty acid via an amide linkage). In addition, it contains one polar head group, which is either phosphocholine or phosphoethanolamine. The plasma membrane of cells is highly enriched in sphingomyelin and is considered largely to be found in the exoplasmic leaflet of the cell membrane. However, there is some evidence that there may also be a sphingomyelin pool in the inner leaflet of the membrane. Moreover, neutral sphingomyelinase-2, an enzyme that breaks down sphingomyelin into ceramide, has been found to localize exclusively to the inner leaflet further suggesting that there may be sphingomyelin present there. Sphingomyelin can accumulate in a rare hereditary disease called Niemann-Pick Disease, types A and B. Niemann-Pick disease is a genetically-inherited disease caused by a deficiency in the enzyme sphingomyelinase, which causes the accumulation of sphingomyelin in spleen, liver, lungs, bone marrow, and the brain, causing irreversible neurological damage. SMs play a role in signal transduction. Sphingomyelins are synthesized by the transfer of phosphorylcholine from phosphatidylcholine to a ceramide in a reaction catalyzed by sphingomyelin synthase.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))
  Mrv1652309162106082D          

 55 54  0  0  1  0            999 V2000
   -2.3824    0.3590    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6679    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9699   -0.3554    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7950   -0.3554    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9591    0.3596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2446    0.7721    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6570    1.4868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1679    0.0574    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    0.4700    1.1847    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1845    0.7721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8991    1.1847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6136    0.7721    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
    2.2010    0.0576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2748    1.6361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3280    0.3597    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0969    0.7716    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0969    1.5431    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8110    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5251    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2392    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9534    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6675    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3816    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0957    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8099    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5240    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2381    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9522    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6663    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3804    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.0945    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8086    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2236   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9377   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6518   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3660   -0.7679    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.3660   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0801   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9051   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6192   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3333   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0475   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7616   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.4757   -0.7679    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
  -11.4757   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1898   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.9039   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.7289   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.4430   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1571   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.8712   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.5854   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.2995   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  3  1  1  0  0  0
  1  4  1  0  0  0  0
  1 16  1  0  0  0  0
  2  1  1  0  0  0  0
  4 33  1  0  0  0  0
  5  2  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  2  0  0  0  0
  8  6  1  0  0  0  0
  9 10  1  0  0  0  0
  9  6  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 12 15  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  1  0  0  0
 38 40  1  0  0  0  0
 40 41  2  0  0  0  0
 41 42  1  0  0  0  0
 42 43  2  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  1  0  0  0
 46 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  2  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
M  CHG  2   8  -1  12   1
M  END

HMDB0290470
     RDKit          3D
SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))
135134  0  0  0  0  0  0  0  0999 V2000
   -5.6471   -2.0066    2.7379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9174   -1.2514    1.4831 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7753   -2.0899    0.2155 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0819   -1.1638   -0.9377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9849   -1.8579   -2.2899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2973   -0.8315   -3.3047 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4434   -0.4925   -4.2252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0976   -1.0504   -4.3953 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0712   -1.6786   -5.7989 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0863   -2.6642   -5.7572 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8123   -2.3233   -6.1398 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5963   -1.9779   -5.7120 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4165   -2.7035   -6.1259 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8055   -2.3479   -5.6860 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9288   -3.1320   -6.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1441   -2.9025   -5.8151 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5042   -1.7731   -4.8778 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8810   -0.5972   -5.2880 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9750   -1.5860   -5.0964 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6998   -0.5811   -4.3027 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7199   -0.7992   -2.8483 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5025   -0.5845   -2.0573 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7264    0.2965   -2.4905 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2733   -1.3166   -0.9195 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.2917   -1.3449    0.0923 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8626   -1.1281   -0.4270 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8447    0.1531   -0.9519 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3794    0.7033   -1.4937 P   0  0  0  0  0  5  0  0  0  0  0  0
    0.1250    0.5074   -2.9661 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9133    0.0914   -0.5681 O   0  0  0  0  0  1  0  0  0  0  0  0
    0.3704    2.3996   -1.2222 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5446    2.7847   -0.5782 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5269    4.2501   -0.3477 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6861    4.7755    0.3045 N   0  0  0  0  0  4  0  0  0  0  0  0
    3.4487    3.8334    1.0740 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6277    5.3819   -0.6472 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2983    5.8506    1.2088 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4125   -2.4456    1.0692 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.3075   -3.7150    0.4434 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4494   -2.4318    2.2039 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5298   -1.1862    3.0413 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5314   -1.2734    4.1755 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5163   -0.0824    5.0713 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1521    1.1857    4.3393 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1431    2.3827    5.2528 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7790    3.6501    4.5630 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4928    3.7640    3.8419 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7814    3.6147    4.5200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0811    2.2816    5.1215 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4735    2.3528    5.7656 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8301    1.0210    6.3572 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8378    0.6132    7.3892 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2184   -0.7329    8.0112 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1810   -1.1202    9.0561 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5735   -2.3948    3.1617 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8398   -2.7685    2.6040 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2131   -1.2741    3.4749 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9821   -0.9075    1.4966 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2912   -0.3558    1.3365 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5771   -2.8474    0.2393 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8127   -2.5885    0.1249 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0666   -0.7002   -0.8661 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3047   -0.3494   -0.9587 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9776   -2.2611   -2.3494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7011   -2.7179   -2.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3128   -0.3308   -3.2708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7181    0.2883   -4.9706 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3218   -0.2135   -4.4265 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7353   -1.7533   -3.6554 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4325   -0.9562   -6.5607 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7018   -3.5156   -5.4196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8060   -3.1973   -6.8189 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5087   -1.1436   -5.0502 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5403   -3.5411   -6.8008 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8094   -1.5223   -5.0293 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6887   -3.9769   -6.8625 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9604   -3.5511   -6.2196 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3286   -2.0408   -3.8250 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5686    0.0343   -5.5871 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1522   -1.3471   -6.2110 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5113   -2.5801   -4.9274 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2908    0.4463   -4.5593 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7640   -0.5049   -4.7023 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5204   -0.1536   -2.3541 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0908   -1.8527   -2.6411 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0474   -2.0978   -0.7361 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4262   -0.3432    0.6603 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5409   -1.9188   -1.1010 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1943   -1.1812    0.4868 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3798    2.4788   -1.2575 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6974    2.1856    0.3472 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4689    4.7504   -1.3450 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5973    4.5626    0.2007 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9368    3.4382    1.9629 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3239    4.4192    1.4869 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9188    3.0205    0.4645 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6791    5.1953   -0.3362 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5193    6.4853   -0.6764 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4993    4.9925   -1.6701 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6725    6.6111    0.6706 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2008    6.3831    1.5997 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7135    5.5131    2.0703 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4407   -2.4896    1.5402 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6748   -3.5425   -0.3298 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4274   -2.5863    1.8281 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6454   -3.3329    2.8469 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4693   -0.2612    2.4774 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5452   -1.1936    3.5177 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5109   -1.4518    3.7619 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7282   -2.1670    4.8183 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8446   -0.2053    5.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5541    0.0175    5.5031 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1832    1.0339    3.8219 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9026    1.3887    3.5237 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2812    2.5278    5.4945 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7250    2.2602    6.2347 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8061    4.4708    5.3490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6524    3.9755    3.8959 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5077    3.0923    2.9097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4683    4.8002    3.3342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9085    4.4363    5.2914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6314    3.8225    3.7875 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3716    2.0350    5.9221 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1125    1.4893    4.3472 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4471    3.1635    6.5194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1972    2.5903    4.9356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8746    1.0124    6.7623 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8592    0.2156    5.5622 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6663    1.3643    8.1585 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8641    0.3933    6.8509 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2050   -0.6396    8.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1612   -1.4844    7.2128 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4257   -0.3125    9.1839 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6091   -2.0287    8.7571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6704   -1.2994   10.0381 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  2  0
 28 30  1  0
 28 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 34 36  1  0
 34 37  1  0
 25 38  1  0
 38 39  1  0
 38 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  1  0
 43 44  1  0
 44 45  1  0
 45 46  1  0
 46 47  1  0
 47 48  1  0
 48 49  1  0
 49 50  1  0
 50 51  1  0
 51 52  1  0
 52 53  1  0
 53 54  1  0
  1 55  1  0
  1 56  1  0
  1 57  1  0
  2 58  1  0
  2 59  1  0
  3 60  1  0
  3 61  1  0
  4 62  1  0
  4 63  1  0
  5 64  1  0
  5 65  1  0
  6 66  1  0
  7 67  1  0
  8 68  1  0
  8 69  1  0
  9 70  1  6
 10 71  1  0
 11 72  1  0
 12 73  1  0
 13 74  1  0
 14 75  1  0
 15 76  1  0
 16 77  1  0
 17 78  1  1
 18 79  1  0
 19 80  1  0
 19 81  1  0
 20 82  1  0
 20 83  1  0
 21 84  1  0
 21 85  1  0
 24 86  1  0
 25 87  1  1
 26 88  1  0
 26 89  1  0
 32 90  1  0
 32 91  1  0
 33 92  1  0
 33 93  1  0
 35 94  1  0
 35 95  1  0
 35 96  1  0
 36 97  1  0
 36 98  1  0
 36 99  1  0
 37100  1  0
 37101  1  0
 37102  1  0
 38103  1  1
 39104  1  0
 40105  1  0
 40106  1  0
 41107  1  0
 41108  1  0
 42109  1  0
 42110  1  0
 43111  1  0
 43112  1  0
 44113  1  0
 44114  1  0
 45115  1  0
 45116  1  0
 46117  1  0
 46118  1  0
 47119  1  0
 47120  1  0
 48121  1  0
 48122  1  0
 49123  1  0
 49124  1  0
 50125  1  0
 50126  1  0
 51127  1  0
 51128  1  0
 52129  1  0
 52130  1  0
 53131  1  0
 53132  1  0
 54133  1  0
 54134  1  0
 54135  1  0
M  CHG  2  30  -1  34   1
M  END

SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))
  Mrv1652309162106082D          

 55 54  0  0  1  0            999 V2000
   -2.3824    0.3590    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6679    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9699   -0.3554    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7950   -0.3554    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9591    0.3596    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2446    0.7721    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6570    1.4868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1679    0.0574    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    0.4700    1.1847    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1845    0.7721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8991    1.1847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6136    0.7721    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
    2.2010    0.0576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2748    1.6361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3280    0.3597    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0969    0.7716    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.0969    1.5431    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8110    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5251    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2392    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9534    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6675    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3816    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0957    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8099    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5240    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2381    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9522    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6663    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3804    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.0945    0.7716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8086    0.3585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5095   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2236   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9377   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6518   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3660   -0.7679    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.3660   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0801   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9051   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6192   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3333   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0475   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7616   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.4757   -0.7679    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
  -11.4757   -1.5394    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1898   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.9039   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.7289   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.4430   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1571   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.8712   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.5854   -0.7679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.2995   -0.3549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  3  1  1  0  0  0
  1  4  1  0  0  0  0
  1 16  1  0  0  0  0
  2  1  1  0  0  0  0
  4 33  1  0  0  0  0
  5  2  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  2  0  0  0  0
  8  6  1  0  0  0  0
  9 10  1  0  0  0  0
  9  6  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 12 15  1  0  0  0  0
 16 17  1  1  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 33 34  2  0  0  0  0
 33 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  1  0  0  0
 38 40  1  0  0  0  0
 40 41  2  0  0  0  0
 41 42  1  0  0  0  0
 42 43  2  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  1  0  0  0
 46 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  2  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
M  CHG  2   8  -1  12   1
M  END
> <DATABASE_ID>
HMDB0290470

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@@](COP([O-])(=O)OCC[N+](C)(C)C)(NC(=O)CCC[C@@H](O)\C=C/C=C/C=C/[C@@H](O)C\C=C/CCCCC)[C@H](O)CCCCCCCCCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C43H81N2O8P/c1-6-8-10-12-14-15-16-17-18-19-20-22-28-34-42(48)41(38-53-54(50,51)52-37-36-45(3,4)5)44-43(49)35-29-33-40(47)32-27-24-23-26-31-39(46)30-25-21-13-11-9-7-2/h21,23-27,31-32,39-42,46-48H,6-20,22,28-30,33-38H2,1-5H3,(H-,44,49,50,51)/b24-23+,25-21-,31-26+,32-27-/t39-,40-,41-,42+/m0/s1

> <INCHI_KEY>
KDADMEJBRZGIEC-NMORTXKESA-N

> <FORMULA>
C43H81N2O8P

> <MOLECULAR_WEIGHT>
785.101

> <EXACT_MASS>
784.573054574

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
135

> <JCHEM_AVERAGE_POLARIZABILITY>
94.96821424326484

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2-{[(2S,3R)-2-[(5R,6Z,8E,10E,12S,14Z)-5,12-dihydroxyicosa-6,8,10,14-tetraenamido]-3-hydroxyoctadecyl phosphono]oxy}ethyl)trimethylazanium

> <ALOGPS_LOGP>
4.47

> <JCHEM_LOGP>
5.051037836861591

> <ALOGPS_LOGS>
-7.15

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.617608834009033

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8655868456391982

> <JCHEM_PKA_STRONGEST_BASIC>
-0.8450448898183965

> <JCHEM_POLAR_SURFACE_AREA>
148.38

> <JCHEM_REFRACTIVITY>
238.88070000000008

> <JCHEM_ROTATABLE_BOND_COUNT>
37

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.96e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2-{[(2S,3R)-2-[(5R,6Z,8E,10E,12S,14Z)-5,12-dihydroxyicosa-6,8,10,14-tetraenamido]-3-hydroxyoctadecyl phosphono]oxy}ethyl)trimethylazanium

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0290470
     RDKit          3D
SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))
135134  0  0  0  0  0  0  0  0999 V2000
   -5.6471   -2.0066    2.7379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9174   -1.2514    1.4831 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7753   -2.0899    0.2155 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0819   -1.1638   -0.9377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9849   -1.8579   -2.2899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2973   -0.8315   -3.3047 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4434   -0.4925   -4.2252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0976   -1.0504   -4.3953 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0712   -1.6786   -5.7989 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0863   -2.6642   -5.7572 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8123   -2.3233   -6.1398 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5963   -1.9779   -5.7120 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4165   -2.7035   -6.1259 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8055   -2.3479   -5.6860 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9288   -3.1320   -6.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1441   -2.9025   -5.8151 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5042   -1.7731   -4.8778 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8810   -0.5972   -5.2880 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9750   -1.5860   -5.0964 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6998   -0.5811   -4.3027 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7199   -0.7992   -2.8483 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5025   -0.5845   -2.0573 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7264    0.2965   -2.4905 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  CHG  2  30  -1  34   1
M  END

HEADER    PROTEIN                                 16-SEP-21   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))         
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   16-SEP-21         0                                  
HETATM    1  C   UNK     0      -4.447   0.670   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.113   1.440   0.000  0.00  0.00           C+0
HETATM    3  H   UNK     0      -3.677  -0.663   0.000  0.00  0.00           H+0
HETATM    4  N   UNK     0      -5.217  -0.663   0.000  0.00  0.00           N+0
HETATM    5  O   UNK     0      -1.790   0.671   0.000  0.00  0.00           O+0
HETATM    6  P   UNK     0      -0.457   1.441   0.000  0.00  0.00           P+0
HETATM    7  O   UNK     0      -1.226   2.775   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0       0.313   0.107   0.000  0.00  0.00           O-1
HETATM    9  O   UNK     0       0.877   2.211   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       2.211   1.441   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.545   2.211   0.000  0.00  0.00           C+0
HETATM   12  N   UNK     0       4.879   1.441   0.000  0.00  0.00           N+1
HETATM   13  C   UNK     0       4.109   0.108   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.113   3.054   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.212   0.671   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -5.781   1.440   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -5.781   2.880   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -7.114   0.669   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -8.447   1.440   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -9.780   0.669   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0     -11.113   1.440   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0     -12.446   0.669   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0     -13.779   1.440   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0     -15.112   0.669   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0     -16.445   1.440   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0     -17.778   0.669   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0     -19.111   1.440   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0     -20.444   0.669   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0     -21.777   1.440   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0     -23.110   0.669   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0     -24.443   1.440   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0     -25.776   0.669   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -6.551  -1.433   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0      -6.551  -2.873   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0      -7.884  -0.662   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      -9.217  -1.433   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0     -10.550  -0.662   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0     -11.883  -1.433   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0     -11.883  -2.873   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0     -13.216  -0.662   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0     -14.756  -0.662   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0     -16.089  -1.433   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0     -17.422  -0.662   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0     -18.755  -1.433   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0     -20.088  -0.662   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0     -21.421  -1.433   0.000  0.00  0.00           C+0
HETATM   47  O   UNK     0     -21.421  -2.873   0.000  0.00  0.00           O+0
HETATM   48  C   UNK     0     -22.754  -0.662   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0     -24.087  -1.433   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0     -25.627  -1.433   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0     -26.960  -0.662   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0     -28.293  -1.433   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0     -29.626  -0.662   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0     -30.959  -1.433   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0     -32.292  -0.662   0.000  0.00  0.00           C+0
CONECT    1    3    4   16    2                                             
CONECT    2    1    5                                                       
CONECT    3    1                                                            
CONECT    4    1   33                                                       
CONECT    5    2    6                                                       
CONECT    6    5    7    8    9                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9   10    6                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14   15                                             
CONECT   13   12                                                            
CONECT   14   12                                                            
CONECT   15   12                                                            
CONECT   16    1   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31                                                            
CONECT   33    4   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47   48                                                  
CONECT   47   46                                                            
CONECT   48   46   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54                                                            
MASTER        0    0    0    0    0    0    0    0   55    0  108    0
END

COMPND    HMDB0290470
HETATM    1  C1  UNL     1      -5.647  -2.007   2.738  1.00  0.00           C  
HETATM    2  C2  UNL     1      -5.917  -1.251   1.483  1.00  0.00           C  
HETATM    3  C3  UNL     1      -5.775  -2.090   0.215  1.00  0.00           C  
HETATM    4  C4  UNL     1      -6.082  -1.164  -0.938  1.00  0.00           C  
HETATM    5  C5  UNL     1      -5.985  -1.858  -2.290  1.00  0.00           C  
HETATM    6  C6  UNL     1      -6.297  -0.831  -3.305  1.00  0.00           C  
HETATM    7  C7  UNL     1      -5.443  -0.493  -4.225  1.00  0.00           C  
HETATM    8  C8  UNL     1      -4.098  -1.050  -4.395  1.00  0.00           C  
HETATM    9  C9  UNL     1      -4.071  -1.679  -5.799  1.00  0.00           C  
HETATM   10  O1  UNL     1      -5.086  -2.664  -5.757  1.00  0.00           O  
HETATM   11  C10 UNL     1      -2.812  -2.323  -6.140  1.00  0.00           C  
HETATM   12  C11 UNL     1      -1.596  -1.978  -5.712  1.00  0.00           C  
HETATM   13  C12 UNL     1      -0.416  -2.704  -6.126  1.00  0.00           C  
HETATM   14  C13 UNL     1       0.806  -2.348  -5.686  1.00  0.00           C  
HETATM   15  C14 UNL     1       1.929  -3.132  -6.156  1.00  0.00           C  
HETATM   16  C15 UNL     1       3.144  -2.903  -5.815  1.00  0.00           C  
HETATM   17  C16 UNL     1       3.504  -1.773  -4.878  1.00  0.00           C  
HETATM   18  O2  UNL     1       2.881  -0.597  -5.288  1.00  0.00           O  
HETATM   19  C17 UNL     1       4.975  -1.586  -5.096  1.00  0.00           C  
HETATM   20  C18 UNL     1       5.700  -0.581  -4.303  1.00  0.00           C  
HETATM   21  C19 UNL     1       5.720  -0.799  -2.848  1.00  0.00           C  
HETATM   22  C20 UNL     1       4.502  -0.585  -2.057  1.00  0.00           C  
HETATM   23  O3  UNL     1       3.726   0.297  -2.491  1.00  0.00           O  
HETATM   24  N1  UNL     1       4.273  -1.317  -0.919  1.00  0.00           N  
HETATM   25  C21 UNL     1       3.292  -1.345   0.092  1.00  0.00           C  
HETATM   26  C22 UNL     1       1.863  -1.128  -0.427  1.00  0.00           C  
HETATM   27  O4  UNL     1       1.845   0.153  -0.952  1.00  0.00           O  
HETATM   28  P1  UNL     1       0.379   0.703  -1.494  1.00  0.00           P  
HETATM   29  O5  UNL     1       0.125   0.507  -2.966  1.00  0.00           O  
HETATM   30  O6  UNL     1      -0.913   0.091  -0.568  1.00  0.00           O1-
HETATM   31  O7  UNL     1       0.370   2.400  -1.222  1.00  0.00           O  
HETATM   32  C23 UNL     1       1.545   2.785  -0.578  1.00  0.00           C  
HETATM   33  C24 UNL     1       1.527   4.250  -0.348  1.00  0.00           C  
HETATM   34  N2  UNL     1       2.686   4.776   0.304  1.00  0.00           N1+
HETATM   35  C25 UNL     1       3.449   3.833   1.074  1.00  0.00           C  
HETATM   36  C26 UNL     1       3.628   5.382  -0.647  1.00  0.00           C  
HETATM   37  C27 UNL     1       2.298   5.851   1.209  1.00  0.00           C  
HETATM   38  C28 UNL     1       3.412  -2.446   1.069  1.00  0.00           C  
HETATM   39  O8  UNL     1       3.308  -3.715   0.443  1.00  0.00           O  
HETATM   40  C29 UNL     1       2.449  -2.432   2.204  1.00  0.00           C  
HETATM   41  C30 UNL     1       2.530  -1.186   3.041  1.00  0.00           C  
HETATM   42  C31 UNL     1       1.531  -1.273   4.175  1.00  0.00           C  
HETATM   43  C32 UNL     1       1.516  -0.082   5.071  1.00  0.00           C  
HETATM   44  C33 UNL     1       1.152   1.186   4.339  1.00  0.00           C  
HETATM   45  C34 UNL     1       1.143   2.383   5.253  1.00  0.00           C  
HETATM   46  C35 UNL     1       0.779   3.650   4.563  1.00  0.00           C  
HETATM   47  C36 UNL     1      -0.493   3.764   3.842  1.00  0.00           C  
HETATM   48  C37 UNL     1      -1.781   3.615   4.520  1.00  0.00           C  
HETATM   49  C38 UNL     1      -2.081   2.282   5.122  1.00  0.00           C  
HETATM   50  C39 UNL     1      -3.473   2.353   5.766  1.00  0.00           C  
HETATM   51  C40 UNL     1      -3.830   1.021   6.357  1.00  0.00           C  
HETATM   52  C41 UNL     1      -2.838   0.613   7.389  1.00  0.00           C  
HETATM   53  C42 UNL     1      -3.218  -0.733   8.011  1.00  0.00           C  
HETATM   54  C43 UNL     1      -2.181  -1.120   9.056  1.00  0.00           C  
HETATM   55  H1  UNL     1      -6.574  -2.395   3.162  1.00  0.00           H  
HETATM   56  H2  UNL     1      -4.840  -2.769   2.604  1.00  0.00           H  
HETATM   57  H3  UNL     1      -5.213  -1.274   3.475  1.00  0.00           H  
HETATM   58  H4  UNL     1      -6.982  -0.908   1.497  1.00  0.00           H  
HETATM   59  H5  UNL     1      -5.291  -0.356   1.337  1.00  0.00           H  
HETATM   60  H6  UNL     1      -6.577  -2.847   0.239  1.00  0.00           H  
HETATM   61  H7  UNL     1      -4.813  -2.588   0.125  1.00  0.00           H  
HETATM   62  H8  UNL     1      -7.067  -0.700  -0.866  1.00  0.00           H  
HETATM   63  H9  UNL     1      -5.305  -0.349  -0.959  1.00  0.00           H  
HETATM   64  H10 UNL     1      -4.978  -2.261  -2.349  1.00  0.00           H  
HETATM   65  H11 UNL     1      -6.701  -2.718  -2.334  1.00  0.00           H  
HETATM   66  H12 UNL     1      -7.313  -0.331  -3.271  1.00  0.00           H  
HETATM   67  H13 UNL     1      -5.718   0.288  -4.971  1.00  0.00           H  
HETATM   68  H14 UNL     1      -3.322  -0.213  -4.426  1.00  0.00           H  
HETATM   69  H15 UNL     1      -3.735  -1.753  -3.655  1.00  0.00           H  
HETATM   70  H16 UNL     1      -4.433  -0.956  -6.561  1.00  0.00           H  
HETATM   71  H17 UNL     1      -4.702  -3.516  -5.420  1.00  0.00           H  
HETATM   72  H18 UNL     1      -2.806  -3.197  -6.819  1.00  0.00           H  
HETATM   73  H19 UNL     1      -1.509  -1.144  -5.050  1.00  0.00           H  
HETATM   74  H20 UNL     1      -0.540  -3.541  -6.801  1.00  0.00           H  
HETATM   75  H21 UNL     1       0.809  -1.522  -5.029  1.00  0.00           H  
HETATM   76  H22 UNL     1       1.689  -3.977  -6.862  1.00  0.00           H  
HETATM   77  H23 UNL     1       3.960  -3.551  -6.220  1.00  0.00           H  
HETATM   78  H24 UNL     1       3.329  -2.041  -3.825  1.00  0.00           H  
HETATM   79  H25 UNL     1       3.569   0.034  -5.587  1.00  0.00           H  
HETATM   80  H26 UNL     1       5.152  -1.347  -6.211  1.00  0.00           H  
HETATM   81  H27 UNL     1       5.511  -2.580  -4.927  1.00  0.00           H  
HETATM   82  H28 UNL     1       5.291   0.446  -4.559  1.00  0.00           H  
HETATM   83  H29 UNL     1       6.764  -0.505  -4.702  1.00  0.00           H  
HETATM   84  H30 UNL     1       6.520  -0.154  -2.354  1.00  0.00           H  
HETATM   85  H31 UNL     1       6.091  -1.853  -2.641  1.00  0.00           H  
HETATM   86  H32 UNL     1       5.047  -2.098  -0.736  1.00  0.00           H  
HETATM   87  H33 UNL     1       3.426  -0.343   0.660  1.00  0.00           H  
HETATM   88  H34 UNL     1       1.541  -1.919  -1.101  1.00  0.00           H  
HETATM   89  H35 UNL     1       1.194  -1.181   0.487  1.00  0.00           H  
HETATM   90  H36 UNL     1       2.380   2.479  -1.257  1.00  0.00           H  
HETATM   91  H37 UNL     1       1.697   2.186   0.347  1.00  0.00           H  
HETATM   92  H38 UNL     1       1.469   4.750  -1.345  1.00  0.00           H  
HETATM   93  H39 UNL     1       0.597   4.563   0.201  1.00  0.00           H  
HETATM   94  H40 UNL     1       2.937   3.438   1.963  1.00  0.00           H  
HETATM   95  H41 UNL     1       4.324   4.419   1.487  1.00  0.00           H  
HETATM   96  H42 UNL     1       3.919   3.021   0.465  1.00  0.00           H  
HETATM   97  H43 UNL     1       4.679   5.195  -0.336  1.00  0.00           H  
HETATM   98  H44 UNL     1       3.519   6.485  -0.676  1.00  0.00           H  
HETATM   99  H45 UNL     1       3.499   4.993  -1.670  1.00  0.00           H  
HETATM  100  H46 UNL     1       1.673   6.611   0.671  1.00  0.00           H  
HETATM  101  H47 UNL     1       3.201   6.383   1.600  1.00  0.00           H  
HETATM  102  H48 UNL     1       1.714   5.513   2.070  1.00  0.00           H  
HETATM  103  H49 UNL     1       4.441  -2.490   1.540  1.00  0.00           H  
HETATM  104  H50 UNL     1       2.675  -3.542  -0.330  1.00  0.00           H  
HETATM  105  H51 UNL     1       1.427  -2.586   1.828  1.00  0.00           H  
HETATM  106  H52 UNL     1       2.645  -3.333   2.847  1.00  0.00           H  
HETATM  107  H53 UNL     1       2.469  -0.261   2.477  1.00  0.00           H  
HETATM  108  H54 UNL     1       3.545  -1.194   3.518  1.00  0.00           H  
HETATM  109  H55 UNL     1       0.511  -1.452   3.762  1.00  0.00           H  
HETATM  110  H56 UNL     1       1.728  -2.167   4.818  1.00  0.00           H  
HETATM  111  H57 UNL     1       0.845  -0.205   5.945  1.00  0.00           H  
HETATM  112  H58 UNL     1       2.554   0.018   5.503  1.00  0.00           H  
HETATM  113  H59 UNL     1       0.183   1.034   3.822  1.00  0.00           H  
HETATM  114  H60 UNL     1       1.903   1.389   3.524  1.00  0.00           H  
HETATM  115  H61 UNL     1       2.281   2.528   5.494  1.00  0.00           H  
HETATM  116  H62 UNL     1       0.725   2.260   6.235  1.00  0.00           H  
HETATM  117  H63 UNL     1       0.806   4.471   5.349  1.00  0.00           H  
HETATM  118  H64 UNL     1       1.652   3.975   3.896  1.00  0.00           H  
HETATM  119  H65 UNL     1      -0.508   3.092   2.910  1.00  0.00           H  
HETATM  120  H66 UNL     1      -0.468   4.800   3.334  1.00  0.00           H  
HETATM  121  H67 UNL     1      -1.909   4.436   5.291  1.00  0.00           H  
HETATM  122  H68 UNL     1      -2.631   3.823   3.787  1.00  0.00           H  
HETATM  123  H69 UNL     1      -1.372   2.035   5.922  1.00  0.00           H  
HETATM  124  H70 UNL     1      -2.112   1.489   4.347  1.00  0.00           H  
HETATM  125  H71 UNL     1      -3.447   3.164   6.519  1.00  0.00           H  
HETATM  126  H72 UNL     1      -4.197   2.590   4.936  1.00  0.00           H  
HETATM  127  H73 UNL     1      -4.875   1.012   6.762  1.00  0.00           H  
HETATM  128  H74 UNL     1      -3.859   0.216   5.562  1.00  0.00           H  
HETATM  129  H75 UNL     1      -2.666   1.364   8.158  1.00  0.00           H  
HETATM  130  H76 UNL     1      -1.864   0.393   6.851  1.00  0.00           H  
HETATM  131  H77 UNL     1      -4.205  -0.640   8.487  1.00  0.00           H  
HETATM  132  H78 UNL     1      -3.161  -1.484   7.213  1.00  0.00           H  
HETATM  133  H79 UNL     1      -1.426  -0.312   9.184  1.00  0.00           H  
HETATM  134  H80 UNL     1      -1.609  -2.029   8.757  1.00  0.00           H  
HETATM  135  H81 UNL     1      -2.670  -1.299  10.038  1.00  0.00           H  
CONECT    1    2   55   56   57
CONECT    2    3   58   59
CONECT    3    4   60   61
CONECT    4    5   62   63
CONECT    5    6   64   65
CONECT    6    7    7   66
CONECT    7    8   67
CONECT    8    9   68   69
CONECT    9   10   11   70
CONECT   10   71
CONECT   11   12   12   72
CONECT   12   13   73
CONECT   13   14   14   74
CONECT   14   15   75
CONECT   15   16   16   76
CONECT   16   17   77
CONECT   17   18   19   78
CONECT   18   79
CONECT   19   20   80   81
CONECT   20   21   82   83
CONECT   21   22   84   85
CONECT   22   23   23   24
CONECT   24   25   86
CONECT   25   26   38   87
CONECT   26   27   88   89
CONECT   27   28
CONECT   28   29   29   30   31
CONECT   31   32
CONECT   32   33   90   91
CONECT   33   34   92   93
CONECT   34   35   36   37
CONECT   35   94   95   96
CONECT   36   97   98   99
CONECT   37  100  101  102
CONECT   38   39   40  103
CONECT   39  104
CONECT   40   41  105  106
CONECT   41   42  107  108
CONECT   42   43  109  110
CONECT   43   44  111  112
CONECT   44   45  113  114
CONECT   45   46  115  116
CONECT   46   47  117  118
CONECT   47   48  119  120
CONECT   48   49  121  122
CONECT   49   50  123  124
CONECT   50   51  125  126
CONECT   51   52  127  128
CONECT   52   53  129  130
CONECT   53   54  131  132
CONECT   54  133  134  135
END

HMDB0290470
     RDKit          3D
SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R))
135134  0  0  0  0  0  0  0  0999 V2000
   -5.6471   -2.0066    2.7379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9174   -1.2514    1.4831 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7753   -2.0899    0.2155 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0819   -1.1638   -0.9377 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9849   -1.8579   -2.2899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2973   -0.8315   -3.3047 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4434   -0.4925   -4.2252 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0976   -1.0504   -4.3953 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0712   -1.6786   -5.7989 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0863   -2.6642   -5.7572 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8123   -2.3233   -6.1398 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5963   -1.9779   -5.7120 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4165   -2.7035   -6.1259 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8055   -2.3479   -5.6860 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9288   -3.1320   -6.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1441   -2.9025   -5.8151 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5042   -1.7731   -4.8778 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8810   -0.5972   -5.2880 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9750   -1.5860   -5.0964 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6998   -0.5811   -4.3027 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7199   -0.7992   -2.8483 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5025   -0.5845   -2.0573 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7264    0.2965   -2.4905 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2733   -1.3166   -0.9195 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.2917   -1.3449    0.0923 C   0  0  1  0  0  0  0  0  0  0  0  0
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M  CHG  2  30  -1  34   1
M  END

View in JSmol View Stereo Labels

Synonyms

Not Available

Chemical Formula

C₄₃H₈₁N₂O₈P

Average Molecular Weight

785.101

Monoisotopic Molecular Weight

784.573054574

IUPAC Name

(2-{[(2S,3R)-2-[(5R,6Z,8E,10E,12S,14Z)-5,12-dihydroxyicosa-6,8,10,14-tetraenamido]-3-hydroxyoctadecyl phosphono]oxy}ethyl)trimethylazanium

Traditional Name

(2-{[(2S,3R)-2-[(5R,6Z,8E,10E,12S,14Z)-5,12-dihydroxyicosa-6,8,10,14-tetraenamido]-3-hydroxyoctadecyl phosphono]oxy}ethyl)trimethylazanium

CAS Registry Number

Not Available

SMILES

[H][C@@](COP([O-])(=O)OCC[N+](C)(C)C)(NC(=O)CCC[C@@H](O)\C=C/C=C/C=C/[C@@H](O)C\C=C/CCCCC)[C@H](O)CCCCCCCCCCCCCCC

InChI Identifier

InChI=1S/C43H81N2O8P/c1-6-8-10-12-14-15-16-17-18-19-20-22-28-34-42(48)41(38-53-54(50,51)52-37-36-45(3,4)5)44-43(49)35-29-33-40(47)32-27-24-23-26-31-39(46)30-25-21-13-11-9-7-2/h21,23-27,31-32,39-42,46-48H,6-20,22,28-30,33-38H2,1-5H3,(H-,44,49,50,51)/b24-23+,25-21-,31-26+,32-27-/t39-,40-,41-,42+/m0/s1

InChI Key

KDADMEJBRZGIEC-NMORTXKESA-N

Chemical Taxonomy

Classification

Not classified

Ontology

All cells and tissues (HMDB: HMDB0290470)

Cellular substructure

Organelle

Endoplasmic reticulum (PMID: 9009829)

Cell membrane (PMID: 9009829)
Golgi apparatus membrane (PMID: 11062253)

Source

Endogenous

Endogenous (HMDB: HMDB0290470)

Process

Naturally occurring process

Biological process

Cellular process

Cell signaling (PMID: 8086039)

Role

Biological role

Nutrient (PMID: 23684760)

Industrial application

Pharmaceutical industry

Biomarker

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	4.47	ALOGPS
logP	5.05	ChemAxon
logS	-7.2	ALOGPS
pKa (Strongest Acidic)	1.87	ChemAxon
pKa (Strongest Basic)	-0.85	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	148.38 Å²	ChemAxon
Rotatable Bond Count	37	ChemAxon
Refractivity	238.88 m³·mol⁻¹	ChemAxon
Polarizability	94.97 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	292.487	32859911
AllCCS	[M+H-H2O]+	292.344	32859911
AllCCS	[M+Na]+	292.615	32859911
AllCCS	[M+NH4]+	292.591	32859911
AllCCS	[M-H]-	286.448	32859911
AllCCS	[M+Na-2H]-	291.091	32859911
AllCCS	[M+HCOO]-	296.206	32859911
DeepCCS	[M+H]+	298.678	30932474
DeepCCS	[M-H]-	296.782	30932474
DeepCCS	[M-2H]-	330.333	30932474
DeepCCS	[M+Na]+	304.456	30932474

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022.	7.13 minutes	32390414
Predicted by Siyang on May 30, 2022	24.6714 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	3.1 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	4583.2 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	162.7 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	329.3 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	193.8 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	664.0 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	1260.3 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	854.5 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	680.9 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	2966.0 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	959.5 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	2702.5 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	742.7 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	680.5 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	166.5 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	82.8 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	10.4 seconds	40023050

Predicted Kovats Retention Indices

Not Available

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 10V, Positive-QTOF	splash10-0019-0600000900-d8df1556a2ebf0223d96	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 20V, Positive-QTOF	splash10-0019-0600000900-d8df1556a2ebf0223d96	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 40V, Positive-QTOF	splash10-001i-0900000300-a4249ce2c82ef875e492	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 10V, Positive-QTOF	splash10-0006-0000001900-ad1c35a895b96a83e986	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 20V, Positive-QTOF	splash10-0a4o-0000007900-10dfe762434cc3ebae47	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 40V, Positive-QTOF	splash10-0a4i-0000019200-55b843b91391c75feff8	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 10V, Positive-QTOF	splash10-0a4i-0000001190-a5683f3667ff8e515886	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 20V, Positive-QTOF	splash10-0ai0-0000009290-5d4a5a07f5bd0e449768	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) 40V, Positive-QTOF	splash10-00di-0000019110-816a21a718545eb30a23	2021-10-21	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)) (HMDB0290470)

MOL for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

3D MOL for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

3D SDF for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

3D-SDF for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

PDB for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

3D PDB for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

SMILES for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

INCHI for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

Structure for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

3D Structure for HMDB0290470 (SM(d18:0/20:4(6Z,8E,10E,14Z)-2OH(5S,12R)))

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

MS/MS Spectra