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Showing metabocard for Sphondin (HMDB0302839)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 21:04:13 UTC
Update Date2021-09-23 21:04:13 UTC
HMDB IDHMDB0302839
Secondary Accession NumbersNone
Metabolite Identification
Common NameSphondin
DescriptionSphondin is a member of the class of compounds known as angular furanocoumarins. Angular furanocoumarins are furanocoumarins, with a structure characterized by a furan ring angularly fused to a coumarin. Sphondin is practically insoluble (in water) and an extremely weak basic (essentially neutral) compound (based on its pKa). Sphondin can be found in parsnip, which makes sphondin a potential biomarker for the consumption of this food product. Sphondin is a non-carcinogenic (not listed by IARC) potentially toxic compound. The furocoumarin 8-methoxypsoralen is carcinogenic to humans, and possibly 5-methoxypsoralen as well (L135). There is some evidence from mouse studies that other furocoumarins are carcinogenic when combined with exposure to UVA radiation (A15105). The SKLM regards the additional risk of skin cancer arising from the consumption of typical quantities of furocoumarin-containing foods, which remain significantly below the range of phototoxic doses, as insignificant. However, the consumption of phototoxic quantities cannot be ruled out for certain foods, particularly celery and parsnips, that may lead to significant increases in furocoumarin concentrations, depending on the storage, processing and production conditions (L2157) Furocoumarin photochemotherapy is known to induce a number of side-effects including erythema, edema, hyperpigmentation, and premature aging of skin. All photobiological effects of furocoumarins result from their photochemical reactions. Because many dietary or water soluble furocoumarins are strong inhibitors of cytochrome P450s, they will also cause adverse drug reactions when taken with other drugs. Cause of phototoxicity in patient with vitiligo (L579) (T3DB).
Structure
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MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0302839 (Sphondin)

Sphondin 
  Mrv1572001071617272D          
 
 16 18  0  0  0  0            999 V2000
   18.6450  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6450  -15.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3462  -15.4275    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0887  -15.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0887  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3462  -13.7775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7900  -15.4275    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.4912  -15.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.4912  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7900  -13.7775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.2337  -15.4275    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.0262  -15.5512    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.3562  -16.3350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1812  -16.2525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9437  -13.7775    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.2425  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  4  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
  8 11  2  0  0  0  0
  2 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  3 14  1  0  0  0  0
  1 15  1  0  0  0  0
 15 16  1  0  0  0  0
M  END
Download

3D MOL for HMDB0302839 (Sphondin)

HMDB0302839
     RDKit          3D
Sphondin
 24 26  0  0  0  0  0  0  0  0999 V2000
    3.4227   -1.1532   -0.7501 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8044    0.1027   -0.5759 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4643    0.1720   -0.2966 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7329   -0.9805   -0.1883 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6191   -0.9330    0.0927 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3810   -2.0735    0.2077 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7141   -1.9166    0.4888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2578   -0.6649    0.6475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5157   -0.5600    0.9112 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5153    0.4004    0.5337 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2479    0.3017    0.2683 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4994    1.4601    0.1567 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7936    2.8014    0.2672 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3982    3.4884    0.0466 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3601    2.6059   -0.1847 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8432    1.4017   -0.1227 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4811   -1.7437    0.1861 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8677   -1.7418   -1.4896 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4662   -0.9844   -1.0836 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2069   -1.9413   -0.3218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8931   -3.0274    0.0715 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3437   -2.7916    0.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7705    3.2143    0.4843 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5034    4.5632    0.0648 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16  3  1  0
 11  5  2  0
 16 12  2  0
  1 17  1  0
  1 18  1  0
  1 19  1  0
  4 20  1  0
  6 21  1  0
  7 22  1  0
 13 23  1  0
 14 24  1  0
M  END
Download

3D SDF for HMDB0302839 (Sphondin)

Sphondin 
  Mrv1572001071617272D          
 
 16 18  0  0  0  0            999 V2000
   18.6450  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.6450  -15.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3462  -15.4275    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0887  -15.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0887  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.3462  -13.7775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7900  -15.4275    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.4912  -15.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.4912  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7900  -13.7775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.2337  -15.4275    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.0262  -15.5512    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.3562  -16.3350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1812  -16.2525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9437  -13.7775    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.2425  -14.1900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  1  6  1  0  0  0  0
  4  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
  8 11  2  0  0  0  0
  2 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
  3 14  1  0  0  0  0
  1 15  1  0  0  0  0
 15 16  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0302839

> <DATABASE_NAME>
hmdb

> <SMILES>
COC1=C2OC=CC2=C2OC(=O)C=CC2=C1

> <INCHI_IDENTIFIER>
InChI=1S/C12H8O4/c1-14-9-6-7-2-3-10(13)16-11(7)8-4-5-15-12(8)9/h2-6H,1H3

> <INCHI_KEY>
DLCJNIBLOSKIQW-UHFFFAOYSA-N

> <FORMULA>
C12H8O4

> <MOLECULAR_WEIGHT>
216.192

> <EXACT_MASS>
216.042258738

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
24

> <JCHEM_AVERAGE_POLARIZABILITY>
20.980407738407216

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
6-methoxy-2H-furo[2,3-h]chromen-2-one

> <ALOGPS_LOGP>
2.07

> <JCHEM_LOGP>
1.7848117503333332

> <ALOGPS_LOGS>
-3.14

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9338859622322193

> <JCHEM_POLAR_SURFACE_AREA>
48.67

> <JCHEM_REFRACTIVITY>
56.85290000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.56e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
6-methoxyfuro[2,3-h]chromen-2-one

> <JCHEM_VEBER_RULE>
0

$$$$
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3D-SDF for HMDB0302839 (Sphondin)

HMDB0302839
     RDKit          3D
Sphondin
 24 26  0  0  0  0  0  0  0  0999 V2000
    3.4227   -1.1532   -0.7501 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8044    0.1027   -0.5759 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4643    0.1720   -0.2966 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7329   -0.9805   -0.1883 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6191   -0.9330    0.0927 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3810   -2.0735    0.2077 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7141   -1.9166    0.4888 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2578   -0.6649    0.6475 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5157   -0.5600    0.9112 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5153    0.4004    0.5337 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2479    0.3017    0.2683 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4994    1.4601    0.1567 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7936    2.8014    0.2672 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3982    3.4884    0.0466 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3601    2.6059   -0.1847 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8432    1.4017   -0.1227 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4811   -1.7437    0.1861 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8677   -1.7418   -1.4896 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4662   -0.9844   -1.0836 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2069   -1.9413   -0.3218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8931   -3.0274    0.0715 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3437   -2.7916    0.5863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7705    3.2143    0.4843 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5034    4.5632    0.0648 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16  3  1  0
 11  5  2  0
 16 12  2  0
  1 17  1  0
  1 18  1  0
  1 19  1  0
  4 20  1  0
  6 21  1  0
  7 22  1  0
 13 23  1  0
 14 24  1  0
M  END
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PDB for HMDB0302839 (Sphondin)

HEADER    PROTEIN                                 07-JAN-16   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: Sphondin                                          
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-JAN-16         0                                  
HETATM    1  C   UNK     0      34.804 -26.488   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      34.804 -28.028   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      36.113 -28.798   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      37.499 -28.028   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      37.499 -26.488   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      36.113 -25.718   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      38.808 -28.798   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      40.117 -28.028   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      40.117 -26.488   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      38.808 -25.718   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      41.503 -28.798   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      33.649 -29.029   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      34.265 -30.492   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      35.805 -30.338   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      33.495 -25.718   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      32.186 -26.488   0.000  0.00  0.00           C+0
CONECT    1    2    6   15                                                  
CONECT    2    1    3   12                                                  
CONECT    3    2    4   14                                                  
CONECT    4    3    5    7                                                  
CONECT    5    4    6   10                                                  
CONECT    6    5    1                                                       
CONECT    7    4    8                                                       
CONECT    8    7    9   11                                                  
CONECT    9    8   10                                                       
CONECT   10    9    5                                                       
CONECT   11    8                                                            
CONECT   12    2   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    3                                                       
CONECT   15    1   16                                                       
CONECT   16   15                                                            
MASTER        0    0    0    0    0    0    0    0   16    0   36    0
END
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3D PDB for HMDB0302839 (Sphondin)

COMPND    HMDB0302839
HETATM    1  C1  UNL     1       3.423  -1.153  -0.750  1.00  0.00           C  
HETATM    2  O1  UNL     1       2.804   0.103  -0.576  1.00  0.00           O  
HETATM    3  C2  UNL     1       1.464   0.172  -0.297  1.00  0.00           C  
HETATM    4  C3  UNL     1       0.733  -0.981  -0.188  1.00  0.00           C  
HETATM    5  C4  UNL     1      -0.619  -0.933   0.093  1.00  0.00           C  
HETATM    6  C5  UNL     1      -1.381  -2.073   0.208  1.00  0.00           C  
HETATM    7  C6  UNL     1      -2.714  -1.917   0.489  1.00  0.00           C  
HETATM    8  C7  UNL     1      -3.258  -0.665   0.647  1.00  0.00           C  
HETATM    9  O2  UNL     1      -4.516  -0.560   0.911  1.00  0.00           O  
HETATM   10  O3  UNL     1      -2.515   0.400   0.534  1.00  0.00           O  
HETATM   11  C8  UNL     1      -1.248   0.302   0.268  1.00  0.00           C  
HETATM   12  C9  UNL     1      -0.499   1.460   0.157  1.00  0.00           C  
HETATM   13  C10 UNL     1      -0.794   2.801   0.267  1.00  0.00           C  
HETATM   14  C11 UNL     1       0.398   3.488   0.047  1.00  0.00           C  
HETATM   15  O4  UNL     1       1.360   2.606  -0.185  1.00  0.00           O  
HETATM   16  C12 UNL     1       0.843   1.402  -0.123  1.00  0.00           C  
HETATM   17  H1  UNL     1       3.481  -1.744   0.186  1.00  0.00           H  
HETATM   18  H2  UNL     1       2.868  -1.742  -1.490  1.00  0.00           H  
HETATM   19  H3  UNL     1       4.466  -0.984  -1.084  1.00  0.00           H  
HETATM   20  H4  UNL     1       1.207  -1.941  -0.322  1.00  0.00           H  
HETATM   21  H5  UNL     1      -0.893  -3.027   0.072  1.00  0.00           H  
HETATM   22  H6  UNL     1      -3.344  -2.792   0.586  1.00  0.00           H  
HETATM   23  H7  UNL     1      -1.770   3.214   0.484  1.00  0.00           H  
HETATM   24  H8  UNL     1       0.503   4.563   0.065  1.00  0.00           H  
CONECT    1    2   17   18   19
CONECT    2    3
CONECT    3    4    4   16
CONECT    4    5   20
CONECT    5    6   11   11
CONECT    6    7    7   21
CONECT    7    8   22
CONECT    8    9    9   10
CONECT   10   11
CONECT   11   12
CONECT   12   13   16   16
CONECT   13   14   14   23
CONECT   14   15   24
CONECT   15   16
END
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SMILES for HMDB0302839 (Sphondin)

COC1=C2OC=CC2=C2OC(=O)C=CC2=C1
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INCHI for HMDB0302839 (Sphondin)

InChI=1S/C12H8O4/c1-14-9-6-7-2-3-10(13)16-11(7)8-4-5-15-12(8)9/h2-6H,1H3
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SynonymsNot Available
Chemical FormulaC12H8O4
Average Molecular Weight216.192
Monoisotopic Molecular Weight216.042258738
IUPAC Name6-methoxy-2H-furo[2,3-h]chromen-2-one
Traditional Name6-methoxyfuro[2,3-h]chromen-2-one
CAS Registry NumberNot Available
SMILES
COC1=C2OC=CC2=C2OC(=O)C=CC2=C1
InChI Identifier
InChI=1S/C12H8O4/c1-14-9-6-7-2-3-10(13)16-11(7)8-4-5-15-12(8)9/h2-6H,1H3
InChI KeyDLCJNIBLOSKIQW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as angular furanocoumarins. These are furanocoumarins, with a structure characterized by a furan ring angularly fused to a coumarin.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCoumarins and derivatives
Sub ClassFuranocoumarins
Direct ParentAngular furanocoumarins
Alternative Parents
Substituents
  • Angular furanocoumarin
  • Benzopyran
  • 1-benzopyran
  • Benzofuran
  • Anisole
  • Alkyl aryl ether
  • Pyranone
  • Pyran
  • Benzenoid
  • Furan
  • Heteroaromatic compound
  • Lactone
  • Oxacycle
  • Ether
  • Organoheterocyclic compound
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Biological locationSource
ProcessNot Available
Role
Biological role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.07ALOGPS
logP1.78ChemAxon
logS-3.1ALOGPS
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area48.67 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity56.85 m³·mol⁻¹ChemAxon
Polarizability20.98 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+145.1732859911
AllCCS[M+H-H2O]+140.83232859911
AllCCS[M+Na]+150.37632859911
AllCCS[M+NH4]+149.21132859911
AllCCS[M-H]-147.17632859911
AllCCS[M+Na-2H]-146.63632859911
AllCCS[M+HCOO]-146.14532859911
DeepCCS[M+H]+145.89830932474
DeepCCS[M-H]-143.50330932474
DeepCCS[M-2H]-176.63830932474
DeepCCS[M+Na]+151.9330932474

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Predicted by Siyang on May 30, 202213.8284 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20221.35 minutes32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1645.3 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid401.6 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid162.3 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid237.4 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid115.0 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid347.2 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid616.3 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)100.5 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid981.6 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid371.8 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1165.8 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid343.7 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid300.6 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate429.7 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA336.8 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water47.9 seconds40023050

Predicted Kovats Retention Indices

Not Available
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Sphondin GC-MS (Non-derivatized) - 70eV, Positivesplash10-00ri-1920000000-d0cfc42a7adf65db46f32017-07-27Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 10V, Positive-QTOFsplash10-014i-0090000000-4767833559e7bd183ce02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 20V, Positive-QTOFsplash10-014i-0190000000-df08e6d6e9848f38ae752016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 40V, Positive-QTOFsplash10-00xr-0920000000-7912ce8688340761f4bd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 10V, Negative-QTOFsplash10-014i-0190000000-bc09763c23f9f26802092016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 20V, Negative-QTOFsplash10-014i-0390000000-7f84cb3b4e865fd1b40e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 40V, Negative-QTOFsplash10-00xu-0910000000-323294242c12aadf4fed2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 10V, Positive-QTOFsplash10-014i-0090000000-7891ec2b2bad4a52dc5c2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 20V, Positive-QTOFsplash10-014i-0390000000-198659b511409c145f1d2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 40V, Positive-QTOFsplash10-044s-0910000000-940fd127f2325e89d9942021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 10V, Negative-QTOFsplash10-014i-0090000000-f3b1b7cd2b3d93168c5f2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 20V, Negative-QTOFsplash10-014i-0090000000-f3b1b7cd2b3d93168c5f2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sphondin 40V, Negative-QTOFsplash10-000i-0910000000-635da7ac10f03a557dd22021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB006438
KNApSAcK IDNot Available
Chemspider ID97199
KEGG Compound IDC18081
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound108104
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available