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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-23 23:40:15 UTC
Update Date2021-09-23 23:40:15 UTC
HMDB IDHMDB0303149
Secondary Accession NumbersNone
Metabolite Identification
Common NameApigenin 7-O-beta-D-rutinoside
DescriptionApigenin 7-o-beta-d-rutinoside, also known as rhoifolin or apigenin-7-O-rhamnoglucoside, is a member of the class of compounds known as flavonoid-7-o-glycosides. Flavonoid-7-o-glycosides are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C7-position. Apigenin 7-o-beta-d-rutinoside is slightly soluble (in water) and a very weakly acidic compound (based on its pKa). Apigenin 7-o-beta-d-rutinoside can be found in carrot, orange mint, and wild carrot, which makes apigenin 7-o-beta-d-rutinoside a potential biomarker for the consumption of these food products.
Structure
Thumb
Synonyms
ValueSource
7-((2-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-benzopyran-4-oneChEBI
Apigenin-7-O-rhamnoglucosideChEBI
RhoifolinChEBI
RhoifolosideChEBI
7-((2-O-(6-Deoxy-a-L-mannopyranosyl)-b-D-glucopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-benzopyran-4-oneGenerator
7-((2-O-(6-Deoxy-α-L-mannopyranosyl)-β-D-glucopyranosyl)oxy)-5-hydroxy-2-(4-hydroxyphenyl)-4H-benzopyran-4-oneGenerator
Apigenin 7-O-b-D-rutinosideGenerator
Apigenin 7-O-β-D-rutinosideGenerator
Chemical FormulaC27H30O14
Average Molecular Weight578.5187
Monoisotopic Molecular Weight578.163555668
IUPAC Name7-{[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}oxan-2-yl]oxy}-5-hydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one
Traditional Namerhoifolin
CAS Registry NumberNot Available
SMILES
C[C@@H]1O[C@@H](O[C@@H]2[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]2OC2=CC3=C(C(O)=C2)C(=O)C=C(O3)C2=CC=C(O)C=C2)[C@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C27H30O14/c1-10-20(32)22(34)24(36)26(37-10)41-25-23(35)21(33)18(9-28)40-27(25)38-13-6-14(30)19-15(31)8-16(39-17(19)7-13)11-2-4-12(29)5-3-11/h2-8,10,18,20-30,32-36H,9H2,1H3/t10-,18+,20-,21+,22+,23-,24+,25+,26-,27+/m0/s1
InChI KeyRPMNUQRUHXIGHK-PYXJVEIZSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonoid-7-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C7-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavonoid glycosides
Direct ParentFlavonoid-7-O-glycosides
Alternative Parents
Substituents
  • Flavonoid-7-o-glycoside
  • Hydroxyflavonoid
  • Flavone
  • 5-hydroxyflavonoid
  • 4'-hydroxyflavonoid
  • Phenolic glycoside
  • Chromone
  • Glycosyl compound
  • Disaccharide
  • O-glycosyl compound
  • Benzopyran
  • 1-benzopyran
  • 1-hydroxy-2-unsubstituted benzenoid
  • 1-hydroxy-4-unsubstituted benzenoid
  • Pyranone
  • Phenol
  • Monocyclic benzene moiety
  • Oxane
  • Benzenoid
  • Pyran
  • Heteroaromatic compound
  • Vinylogous acid
  • Secondary alcohol
  • Acetal
  • Oxacycle
  • Organoheterocyclic compound
  • Polyol
  • Organic oxide
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Primary alcohol
  • Alcohol
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0ALOGPS
logP-0.29ChemAxon
logS-2.4ALOGPS
pKa (Strongest Acidic)8.31ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area225.06 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity135.93 m³·mol⁻¹ChemAxon
Polarizability56.74 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+228.5932859911
AllCCS[M+H-H2O]+227.21132859911
AllCCS[M+Na]+230.18532859911
AllCCS[M+NH4]+229.83432859911
AllCCS[M-H]-222.18532859911
AllCCS[M+Na-2H]-224.16332859911
AllCCS[M+HCOO]-226.47832859911
DeepCCS[M+H]+222.40830932474
DeepCCS[M-H]-220.44330932474
DeepCCS[M-2H]-254.26430932474
DeepCCS[M+Na]+228.48730932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside ESI-TOF 40V, Negative-QTOFsplash10-002r-0905000000-7987816fb8648b0eea182017-08-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside ESI-TOF 10V, Negative-QTOFsplash10-002r-0905000000-7987816fb8648b0eea182017-08-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside ESI-TOF 20V, Negative-QTOFsplash10-002r-0905000000-7987816fb8648b0eea182017-08-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside ESI-TOF , Negative-QTOFsplash10-004i-0000092000-fe08120bacfe47df17f22017-08-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside ESI-TOF 30V, Negative-QTOFsplash10-004i-0000092000-fe08120bacfe47df17f22017-08-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside ESI-TOF 40V, Negative-QTOFsplash10-004i-0000092000-fe08120bacfe47df17f22017-08-14HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside LC-ESI-QFT 40V, positive-QTOFsplash10-001i-0000900000-0e57f1f59429661a74d12020-07-24HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside LC-ESI-IT 40V, positive-QTOFsplash10-00di-0090000000-99129ef4591876751de62020-07-24HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 10V, Positive-QTOFsplash10-00di-0290750000-55a6ae16cf519467ed4f2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 20V, Positive-QTOFsplash10-00di-0190300000-06d3ee053e5687568b072016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 40V, Positive-QTOFsplash10-00di-1390100000-f2c461f6351166e6fd452016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 10V, Negative-QTOFsplash10-02vi-4482980000-bf876ac84a2dcad10a602016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 20V, Negative-QTOFsplash10-014i-2591410000-6e87958379dbe1b683132016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 40V, Negative-QTOFsplash10-014i-6490000000-3ea18c33c05e3b5b5b902016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 10V, Positive-QTOFsplash10-00fr-0090040000-5360a5a561c2a6bbb4a82021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 20V, Positive-QTOFsplash10-00f0-0090910000-02c6a8c796e474e00fb92021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 40V, Positive-QTOFsplash10-00di-0090000000-60b322ff74af8a7655802021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 10V, Negative-QTOFsplash10-004i-0000190000-48e73583084c06ab45612021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 20V, Negative-QTOFsplash10-00pi-0050790000-9b843f6502778be0c2e72021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Apigenin 7-O-beta-D-rutinoside 40V, Negative-QTOFsplash10-014i-0090010000-76c066300921436abb722021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB007976
KNApSAcK IDC00004157
Chemspider ID4445347
KEGG Compound IDC12627
BioCyc IDAPIGENIN-7-O-NEOHESPERIDOSIDE
BiGG IDNot Available
Wikipedia LinkRhoifolin
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID31227
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1698971
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available