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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-24 10:17:30 UTC
Update Date2022-09-22 18:34:38 UTC
HMDB IDHMDB0304504
Secondary Accession NumbersNone
Metabolite Identification
Common Nametrans-3'-hydroxycotinine
DescriptionTrans-3'-hydroxycotinine, also known as 1-methyl-3-hydroxy-5-(3-pyridyl)-2-pyrrolidinone, is a member of the class of compounds known as pyrrolidinylpyridines. Pyrrolidinylpyridines are compounds containing a pyrrolidinylpyridine ring system, which consists of a pyrrolidine ring linked to a pyridine ring. Trans-3'-hydroxycotinine is soluble (in water) and a very weakly acidic compound (based on its pKa). Trans-3'-hydroxycotinine can be found in a number of food items such as annual wild rice, macadamia nut, corn salad, and radish, which makes trans-3'-hydroxycotinine a potential biomarker for the consumption of these food products.
Structure
Thumb
Synonyms
ValueSource
1-Methyl-3-hydroxy-5-(3-pyridyl)-2-pyrrolidinoneMeSH
3'-HydroxycotinineMeSH
3-HydroxycotinineMeSH
Chemical FormulaC10H12N2O2
Average Molecular Weight192.218
Monoisotopic Molecular Weight192.089877634
IUPAC Name3-hydroxy-1-methyl-5-(pyridin-3-yl)pyrrolidin-2-one
Traditional Name3-hydroxy-1-methyl-5-(pyridin-3-yl)pyrrolidin-2-one
CAS Registry NumberNot Available
SMILES
CN1C(CC(O)C1=O)C1=CC=CN=C1
InChI Identifier
InChI=1S/C10H12N2O2/c1-12-8(5-9(13)10(12)14)7-3-2-4-11-6-7/h2-4,6,8-9,13H,5H2,1H3
InChI KeyXOKCJXZZNAUIQN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyrrolidinylpyridines. Pyrrolidinylpyridines are compounds containing a pyrrolidinylpyridine ring system, which consists of a pyrrolidine ring linked to a pyridine ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyridines and derivatives
Sub ClassPyrrolidinylpyridines
Direct ParentPyrrolidinylpyridines
Alternative Parents
Substituents
  • Pyrrolidinylpyridine
  • Alkaloid or derivatives
  • Pyrrolidone
  • 2-pyrrolidone
  • N-alkylpyrrolidine
  • Pyrrolidine
  • Tertiary carboxylic acid amide
  • Heteroaromatic compound
  • Carboxamide group
  • Lactam
  • Secondary alcohol
  • Carboxylic acid derivative
  • Azacycle
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Organooxygen compound
  • Organonitrogen compound
  • Alcohol
  • Carbonyl group
  • Hydrocarbon derivative
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-0.32ALOGPS
logP-0.73ChemAxon
logS-0.61ALOGPS
pKa (Strongest Acidic)13.11ChemAxon
pKa (Strongest Basic)4.79ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area53.43 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity50.73 m³·mol⁻¹ChemAxon
Polarizability19.51 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+143.0232859911
AllCCS[M+H-H2O]+138.60932859911
AllCCS[M+Na]+148.31632859911
AllCCS[M+NH4]+147.1332859911
AllCCS[M-H]-143.55432859911
AllCCS[M+Na-2H]-143.8932859911
AllCCS[M+HCOO]-144.35132859911
DeepCCS[M+H]+139.59730932474
DeepCCS[M-H]-137.20230932474
DeepCCS[M-2H]-172.51130932474
DeepCCS[M+Na]+147.06830932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 10V, Negative-QTOFsplash10-0006-0900000000-507db3f71e793a37d79a2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 20V, Negative-QTOFsplash10-0006-1900000000-dc50aba7536d41b87f1b2015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 40V, Negative-QTOFsplash10-004i-9800000000-3acee66b7383c0812ac92015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 10V, Negative-QTOFsplash10-0006-0900000000-e7b2f7bcd35785f3b3bd2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 20V, Negative-QTOFsplash10-002f-5900000000-020796e72efc2843cc0c2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 40V, Negative-QTOFsplash10-004i-9400000000-d125ee5fd9a8ba2892612021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 10V, Positive-QTOFsplash10-0006-0900000000-10491466da607f26af402015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 20V, Positive-QTOFsplash10-002f-0900000000-78f82d7b225d0b0b29972015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 40V, Positive-QTOFsplash10-0aou-7900000000-0dd265836ac28cc4dc522015-05-27Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 10V, Positive-QTOFsplash10-000f-0900000000-ef6a1b4845a8cb3fafe92021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 20V, Positive-QTOFsplash10-009g-0900000000-c79c308d9471325ffcbf2021-10-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - trans-3'-hydroxycotinine 40V, Positive-QTOFsplash10-0536-6900000000-82585081ee4cac8d3df62021-10-21Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedCancer patients undergoing total body irradiation details
UrineDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedCancer patients undergoing total body irradiation details
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB031206
KNApSAcK IDNot Available
Chemspider ID401
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound414
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available