| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2021-09-24 12:35:47 UTC |
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| Update Date | 2021-09-24 12:35:48 UTC |
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| HMDB ID | HMDB0304811 |
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| Secondary Accession Numbers | None |
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| Metabolite Identification |
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| Common Name | Pro-Pro-Phe |
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| Description | Pro-Pro-Phe belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. Pro-Pro-Phe has been detected, but not quantified in, milk (cow). This could make pro-pro-phe a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Pro-Pro-Phe. |
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| Structure | OC(=O)C(CC1=CC=CC=C1)N=C(O)C1CCCN1C(=O)C1CCCN1 InChI=1S/C19H25N3O4/c23-17(21-15(19(25)26)12-13-6-2-1-3-7-13)16-9-5-11-22(16)18(24)14-8-4-10-20-14/h1-3,6-7,14-16,20H,4-5,8-12H2,(H,21,23)(H,25,26) |
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| Synonyms | | Value | Source |
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| 2-({hydroxy[1-(pyrrolidine-2-carbonyl)pyrrolidin-2-yl]methylidene}amino)-3-phenylpropanoate | HMDB |
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| Chemical Formula | C19H25N3O4 |
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| Average Molecular Weight | 359.426 |
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| Monoisotopic Molecular Weight | 359.184506297 |
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| IUPAC Name | 2-({hydroxy[1-(pyrrolidine-2-carbonyl)pyrrolidin-2-yl]methylidene}amino)-3-phenylpropanoic acid |
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| Traditional Name | 2-({hydroxy[1-(pyrrolidine-2-carbonyl)pyrrolidin-2-yl]methylidene}amino)-3-phenylpropanoic acid |
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| CAS Registry Number | Not Available |
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| SMILES | OC(=O)C(CC1=CC=CC=C1)N=C(O)C1CCCN1C(=O)C1CCCN1 |
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| InChI Identifier | InChI=1S/C19H25N3O4/c23-17(21-15(19(25)26)12-13-6-2-1-3-7-13)16-9-5-11-22(16)18(24)14-8-4-10-20-14/h1-3,6-7,14-16,20H,4-5,8-12H2,(H,21,23)(H,25,26) |
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| InChI Key | NAIPAPCKKRCMBL-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. |
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| Kingdom | Organic compounds |
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| Super Class | Organic acids and derivatives |
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| Class | Carboxylic acids and derivatives |
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| Sub Class | Amino acids, peptides, and analogues |
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| Direct Parent | Oligopeptides |
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| Alternative Parents | |
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| Substituents | - Alpha-oligopeptide
- Phenylalanine or derivatives
- N-acyl-alpha amino acid or derivatives
- N-acyl-alpha-amino acid
- Proline or derivatives
- Alpha-amino acid amide
- 3-phenylpropanoic-acid
- Alpha-amino acid or derivatives
- Amphetamine or derivatives
- N-acylpyrrolidine
- Pyrrolidine-2-carboxamide
- Pyrrolidine carboxylic acid or derivatives
- Benzenoid
- Monocyclic benzene moiety
- Tertiary carboxylic acid amide
- Pyrrolidine
- Carboxamide group
- Secondary carboxylic acid amide
- Amino acid or derivatives
- Amino acid
- Azacycle
- Carboxylic acid
- Secondary aliphatic amine
- Monocarboxylic acid or derivatives
- Organoheterocyclic compound
- Secondary amine
- Organic oxygen compound
- Organic nitrogen compound
- Carbonyl group
- Hydrocarbon derivative
- Amine
- Organopnictogen compound
- Organic oxide
- Organooxygen compound
- Organonitrogen compound
- Aromatic heteromonocyclic compound
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| Molecular Framework | Aromatic heteromonocyclic compounds |
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| External Descriptors | Not Available |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Predicted by Siyang on May 30, 2022 | 10.1288 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 4.51 minutes | 32390414 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 1040.0 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 196.1 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 139.2 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 172.8 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 94.6 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 281.3 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 325.1 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 762.1 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 693.0 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 335.2 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 936.5 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 215.6 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 247.8 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 405.4 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 420.6 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 84.8 seconds | 40023050 |
Predicted Kovats Retention IndicesDerivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| Pro-Pro-Phe,3TMS,isomer #1 | C[Si](C)(C)OC(=O)C(CC1=CC=CC=C1)N=C(O[Si](C)(C)C)C1CCCN1C(=O)C1CCCN1[Si](C)(C)C | 2968.7 | Semi standard non polar | 33892256 | | Pro-Pro-Phe,3TMS,isomer #1 | C[Si](C)(C)OC(=O)C(CC1=CC=CC=C1)N=C(O[Si](C)(C)C)C1CCCN1C(=O)C1CCCN1[Si](C)(C)C | 2955.4 | Standard non polar | 33892256 | | Pro-Pro-Phe,3TMS,isomer #1 | C[Si](C)(C)OC(=O)C(CC1=CC=CC=C1)N=C(O[Si](C)(C)C)C1CCCN1C(=O)C1CCCN1[Si](C)(C)C | 3778.6 | Standard polar | 33892256 | | Pro-Pro-Phe,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)C(CC1=CC=CC=C1)N=C(O[Si](C)(C)C(C)(C)C)C1CCCN1C(=O)C1CCCN1[Si](C)(C)C(C)(C)C | 3639.3 | Semi standard non polar | 33892256 | | Pro-Pro-Phe,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)C(CC1=CC=CC=C1)N=C(O[Si](C)(C)C(C)(C)C)C1CCCN1C(=O)C1CCCN1[Si](C)(C)C(C)(C)C | 3470.7 | Standard non polar | 33892256 | | Pro-Pro-Phe,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)C(CC1=CC=CC=C1)N=C(O[Si](C)(C)C(C)(C)C)C1CCCN1C(=O)C1CCCN1[Si](C)(C)C(C)(C)C | 3965.1 | Standard polar | 33892256 |
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| MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 10V, Positive-QTOF | splash10-03dl-4519000000-ecbc86c5eab6bd28be65 | 2019-02-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 20V, Positive-QTOF | splash10-00xr-9810000000-8131eef4e8ab9795db07 | 2019-02-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 40V, Positive-QTOF | splash10-00dl-9000000000-1e16c0e6038637a4644e | 2019-02-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 10V, Negative-QTOF | splash10-0a4i-0109000000-b8c467c3307b73ebb1ff | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 20V, Negative-QTOF | splash10-03di-6966000000-8df4723dd788bebeb5e5 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 40V, Negative-QTOF | splash10-0303-9600000000-79e365bb754762f00f37 | 2019-02-23 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 10V, Positive-QTOF | splash10-03di-1209000000-e17970e7fb3032225d25 | 2021-10-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 20V, Positive-QTOF | splash10-00di-9513000000-d06f51a977c7cd71904b | 2021-10-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 40V, Positive-QTOF | splash10-00di-9100000000-af11ea4d0e69c651c1e0 | 2021-10-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 10V, Negative-QTOF | splash10-0a4i-0009000000-f9386485f00a04683a60 | 2021-10-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 20V, Negative-QTOF | splash10-0002-9523000000-dbedc6782b9e3f44b81a | 2021-10-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Pro-Pro-Phe 40V, Negative-QTOF | splash10-0gbc-8910000000-fbf39c97d90f7a0b63c1 | 2021-10-22 | Wishart Lab | View Spectrum |
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