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Human Metabolome Database Version 2.5

 

Showing metabocard for Gibberellin A3 (HMDB03559)

Legend: metabolite field enzyme field

Version 2.5
Creation Date 2006-08-13 00:44:01
Update Date 2009-05-19 18:10:55
Accession Number HMDB03559
Secondary Accession Numbers Not Available
Common Name Gibberellin A3
Description Gibberellic acid is a very potent hormone whose natural occurrence in plants controls their development. Since GA regulates growth, applications of very low concentrations can have a profound effect while too much will have the opposite effect. Gibberellic acid is a hormone found in plants. Gibberelic acid is a simple gibberellin promoting growth and elongation of cells. Affects decomposition of plants. Helps plants grow if used in small amounts, but eventually plants grow a tolerance for it. Gibberellic acid stimulates the cells of germinating seeds to produce mRNA molecules that code for hydrolytic enzymes.
Synonyms
  1. 2b-Hydroxygibberellin 1
  2. Berelex
  3. Brellin
  4. GA3
  5. Gib-Sol
  6. Gib-Tabs
  7. Gibb-tabs
  8. Gibberelate
  9. Gibberelic acid
  10. Gibberelin
  11. Gibberellate
  12. Gibberellic acid
  13. Gibberellin
  14. Gibberellin 1
  15. Gibberellin X
  16. Gibberellins
  17. Gibberellinsaeure
  18. Gibberillate
  19. Gibberillic acid
Chemical IUPAC Name 2beta,7alpha-dihydroxy-1beta-methyl-8-methylidene-13-oxo-4a,1alpha-epoxymethano-4aalpha,4bbeta-gibb-3-ene-10beta-carboxylic acid
Chemical Formula C19H22O6
Chemical Structure Structure
Chemical Taxonomy
Kingdom
  • Organic
Super Class
  • Miscellanous
Class
  • Miscellaneous
Sub Class
  • Miscellaneous heterocyclic compounds
Family
  • Mammalian Metabolite
Species
  • secondary alcohol
  • tertiary alcohol
  • carboxylic acid
  • carboxylic acid ester
  • lactone
  • alkene
  • heterocyclic compound
Biofunction
Application
Source
  • Endogenous
Average Molecular Weight 346.374
Monoisotopic Molecular Weight 346.141632
Isomeric SMILES C[C@@]12[C@@H](O)C=C[C@@]3(OC1=O)[C@@H]1CC[C@]4(O)C[C@]1(CC4=C)[C@H]([C@H]23)C(O)=O
Canonical SMILES CC12C(O)C=CC3(OC1=O)C1CCC4(O)CC1(CC4=C)C(C23)C(O)=O
KEGG Compound ID C01699 Link Image
BioCyc ID CPD-6224 Link Image
BiGG ID Not Available
Wikipedia Link GA Link Image
NuGOwiki Link HMDB03559 Link Image
Metagene Link HMDB03559 Link Image
METLIN ID 6954 Link Image
PubChem Compound 439551 Link Image
PubChem Substance 4839 Link Image
ChEBI ID 28833 Link Image
CAS Registry Number 77-06-5
InChI Identifier InChI=1/C19H22O6/c1-9-7-17-8-18(9,24)5-3-10(17)19-6-4-11(20)16(2,15(23)25-19)13(19)12(17)14(21)22/h4,6,10-13,20,24H,1,3,5,7-8H2,2H3,(H,21,22)/t10-,11+,12-,13-,16+,17+,18+,19-/m1/s1
Synthesis Reference Lischewski, Manfred; Adam, Guenter. Gibberellin compounds. Ger. (East) (1979), 10 pp.
Melting Point (Experimental) 234 oC
Experimental Water Solubility 5 mg/mL [SHIU,WY et al.(1990)] Source: PhysProp
Predicted Water Solubility 1.95 mg/mL [Predicted by ALOGPS] Calculated using ALOGPS
Physiological Charge -1
State Solid
Experimental LogP/Hydrophobicity 0.24 [HANSCH,C ET AL. (1995)] Source: PhysProp
Predicted LogP/Hydrophobicity 0.66 [Predicted by ALOGPS]; -0.6 [Predicted by PubChem via XLOGP] Calculated using ALOGPS
Material Safety Data Sheet (MSDS)
MOL File Show Link Image
SDF File Show Link Image
PDB File Show Link Image
2D Structure
3D Structure
Experimental PDB ID Not Available
Experimental 1H NMR Spectrum Not Available
Experimental 13C NMR Spectrum Not Available
Experimental 13C HSQC Spectrum Not Available
Predicted 1H NMR Spectrum Show Image
Show Peaklist
Predicted 13C NMR Spectrum Show Image
Show Peaklist
Mass Spectrum Not Available
Simplified TOCSY Spectrum Not Available
BMRB Spectrum Not Available
Cellular Location Not Available
Biofluid Location Not Available
Tissue Location Not Available
Concentrations (Normal) Not Available
Concentrations (Abnormal) Not Available
Associated Disorders Not Available
OMIM ID Not Available
Pathways Not Available
General References
  1. Yamaki T, Takeda K: [A simple bioassay method of urinary indoleacetic acid, a cancer growth factor] J UOEH. 1986 Mar 20;8 Suppl:297-302. [PubMed Link Image]
  2. Wikipedia Link Image