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Human Metabolome Database Version 3.5

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Showing metabocard for 11-beta-hydroxyandrosterone-3-glucuronide (HMDB10351)

Record Information
Version 3.5
Creation Date 2008-09-16 02:20:34 -0600
Update Date 2013-02-08 17:24:38 -0700
HMDB ID HMDB10351
Secondary Accession Numbers None
Metabolite Identification
Common Name 11-beta-hydroxyandrosterone-3-glucuronide
Description 11-beta-hydroxyandrosterone-3-glucuronide is a natural human metabolite of 11beta-hydroxyandrosterone generated in the liver by UDP glucuonyltransferase. Glucuronidation is used to assist in the excretion of toxic substances, drugs or other substances that cannot be used as an energy source. Glucuronic acid is attached via a glycosidic bond to the substance, and the resulting glucuronide, which has a much higher water solubility than the original substance, is eventually excreted by the kidneys.
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. 11-beta-Hydroxyetiocholanolone-3-glucuronide
  2. 11beta-hydroxyandrosterone 3-glucuronide
Chemical Formula C25H38O9
Average Molecular Weight 482.5638
Monoisotopic Molecular Weight 482.251582814
IUPAC Name (2S,3S,4S,5R,6R)-3,4,5-trihydroxy-6-{[(1S,2S,5R,7S,10S,11S,15S,17S)-17-hydroxy-2,15-dimethyl-14-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-5-yl]oxy}oxane-2-carboxylic acid
Traditional IUPAC Name (2S,3S,4S,5R,6R)-3,4,5-trihydroxy-6-{[(1S,2S,5R,7S,10S,11S,15S,17S)-17-hydroxy-2,15-dimethyl-14-oxotetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-5-yl]oxy}oxane-2-carboxylic acid
CAS Registry Number Not Available
SMILES [H][C@@]12CCC(=O)[C@@]1(C)C[C@H](O)[C@@]1([H])[C@@]2([H])CC[C@@]2([H])C[C@@H](CC[C@]12C)O[C@@H]1O[C@@H]([C@@H](O)[C@H](O)[C@H]1O)C(O)=O
InChI Identifier InChI=1S/C25H38O9/c1-24-8-7-12(33-23-20(30)18(28)19(29)21(34-23)22(31)32)9-11(24)3-4-13-14-5-6-16(27)25(14,2)10-15(26)17(13)24/h11-15,17-21,23,26,28-30H,3-10H2,1-2H3,(H,31,32)/t11-,12+,13-,14-,15-,17+,18-,19-,20+,21-,23+,24-,25-/m0/s1
InChI Key BRPLOVMHAFXVOQ-HUMIJZDLSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Lipids
Class Steroids and Steroid Derivatives
Sub Class Steroidal Glycosides
Other Descriptors
  • Aliphatic Heteropolycyclic Compounds
  • Steroids and Steroid Derivatives
Substituents
  • 1,2 Diol
  • 11 Hydroxy Steroid
  • 17 Keto Steroid
  • Acetal
  • Androgen Skeleton
  • Beta Hydroxy Acid
  • Bicyclohexane
  • Carboxylic Acid
  • Cyclic Alcohol
  • Cyclohexane
  • Decaline
  • Glucuronic Acid Or Derivative
  • Glucuronide
  • Glycosyl Compound
  • Hexose Monosaccharide
  • Ketone
  • O Glycosyl Compound
  • Oxane
  • Saccharide
  • Secondary Alcohol
  • Sesterterpene
  • Sugar Acid
  • Terpene Glycoside
Direct Parent Steroid Glucuronide Conjugates
Ontology
Status Detected and Quantified
Origin
  • Endogenous
  • Food
Biofunction
  • Cell signaling
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane integrity/stability
  • Waste products
Application
  • Nutrients
  • Stabilizers
  • Surfactants and Emulsifiers
Cellular locations
  • Extracellular
  • Membrane
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility Not Available Not Available
LogP Not Available Not Available
Predicted Properties
Property Value Source
Water Solubility 0.78 g/L ALOGPS
LogP 0.80 ALOGPS
LogP 1.01 ChemAxon
LogS -2.79 ALOGPS
pKa (strongest acidic) 3.47 ChemAxon
pKa (strongest basic) -2.8 ChemAxon
Hydrogen Acceptor Count 9 ChemAxon
Hydrogen Donor Count 5 ChemAxon
Polar Surface Area 153.75 A2 ChemAxon
Rotatable Bond Count 3 ChemAxon
Refractivity 117.68 ChemAxon
Polarizability 50.35 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge -1 ChemAxon
Spectra
Not Available
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biofluid Locations
  • Urine
Tissue Location Not Available
Pathways Not Available
Normal Concentrations
Biofluid Status Value Age Sex Condition Comments
Urine Detected and not Quantified
Article_icon
Not Applicable Adult (>18 years old) Both Normal Not Available
Urine Detected and Quantified
Article_icon
0.17 - 0.25 umol/mmol creatinine Adult (>18 years old) Male Normal Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease References None
Associated OMIM IDs None
DrugBank ID Not Available
Phenol Explorer Compound ID Not Available
Phenol Explorer Metabolite ID Not Available
FoodDB ID FDB027503
KNApSAcK ID Not Available
Chemspider ID Not Available
KEGG Compound ID C03033 Link_out
BioCyc ID Beta-D-Glucuronides Link_out
BiGG ID Not Available
Wikipedia Link Not Available
NuGOwiki Link HMDB10351 Link_out
Metagene Link HMDB10351 Link_out
METLIN ID Not Available
PubChem Compound 53480452 Link_out
PDB ID Not Available
ChEBI ID Not Available
References
Synthesis Reference Not Available
Material Safety Data Sheet (MSDS) Not Available
General References Not Available

Enzymes
Name: UDP-glucuronosyltransferase 2B28
Reactions:
    Gene Name: UGT2B28
    Uniprot ID: Q9BY64 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: UDP-glucuronosyltransferase 2B4
    Reactions:
      Gene Name: UGT2B4
      Uniprot ID: P06133 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: UDP-glucuronosyltransferase 1-4
      Reactions:
        Gene Name: UGT1A4
        Uniprot ID: P22310 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: UDP-glucuronosyltransferase 2B10
        Reactions:
          Gene Name: UGT2B10
          Uniprot ID: P36537 Link_out
          Protein Sequence: FASTA
          Gene Sequence: FASTA
          Name: UDP-glucuronosyltransferase 2B7
          Reactions:
            Gene Name: UGT2B7
            Uniprot ID: P16662 Link_out
            Protein Sequence: FASTA
            Gene Sequence: FASTA
            Name: UDP-glucuronosyltransferase 2B15
            Reactions:
              Gene Name: UGT2B15
              Uniprot ID: P54855 Link_out
              Protein Sequence: FASTA
              Gene Sequence: FASTA
              Name: UDP-glucuronosyltransferase 2A1
              Reactions:
                Gene Name: UGT2A1
                Uniprot ID: Q9Y4X1 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: UDP-glucuronosyltransferase 1-1
                Reactions:
                  Gene Name: UGT1A1
                  Uniprot ID: P22309 Link_out
                  Protein Sequence: FASTA
                  Gene Sequence: FASTA
                  Name: UDP-glucuronosyltransferase 1-9
                  Reactions:
                    Gene Name: UGT1A9
                    Uniprot ID: O60656 Link_out
                    Protein Sequence: FASTA
                    Gene Sequence: FASTA
                    Name: UDP-glucuronosyltransferase 1-3
                    Reactions:
                      Gene Name: UGT1A3
                      Uniprot ID: P35503 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: UDP-glucuronosyltransferase 2B17
                      Reactions:
                        Gene Name: UGT2B17
                        Uniprot ID: O75795 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: UDP-glucuronosyltransferase 1-6
                        Reactions:
                          Gene Name: UGT1A6
                          Uniprot ID: P19224 Link_out
                          Protein Sequence: FASTA
                          Gene Sequence: FASTA
                          Name: UDP-glucuronosyltransferase 1-5
                          Reactions:
                            Gene Name: UGT1A5
                            Uniprot ID: P35504 Link_out
                            Protein Sequence: FASTA
                            Gene Sequence: FASTA
                            Name: UDP-glucuronosyltransferase 2B11
                            Reactions:
                              Gene Name: UGT2B11
                              Uniprot ID: O75310 Link_out
                              Protein Sequence: FASTA
                              Gene Sequence: FASTA
                              Name: Beta-glucuronidase
                              Reactions:
                                Gene Name: GUSB
                                Uniprot ID: P08236 Link_out
                                Protein Sequence: FASTA
                                Gene Sequence: FASTA
                                Name: UDP-glucuronosyltransferase 2A3
                                Reactions:
                                  Gene Name: UGT2A3
                                  Uniprot ID: Q6UWM9 Link_out
                                  Protein Sequence: FASTA
                                  Gene Sequence: FASTA
                                  Name: HCG2039726, isoform CRA_f
                                  Reactions:
                                    Gene Name: UGT1A10
                                    Uniprot ID: Q5DT02 Link_out
                                    Protein Sequence: FASTA
                                    Gene Sequence: FASTA
                                    Name: HCG2039726, isoform CRA_e
                                    Reactions:
                                      Gene Name: UGT1A8
                                      Uniprot ID: Q5DSZ6 Link_out
                                      Protein Sequence: FASTA
                                      Gene Sequence: FASTA
                                      Name: UDP glycosyltransferase 1 family polypeptide A7
                                      Reactions:
                                        Gene Name: UGT1A7
                                        Uniprot ID: Q5DSZ7 Link_out
                                        Protein Sequence: FASTA
                                        Gene Sequence: FASTA