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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:37:27 UTC
Update Date2022-03-07 02:52:35 UTC
HMDB IDHMDB0030531
Secondary Accession Numbers
  • HMDB30531
Metabolite Identification
Common NameJanthitrem G
DescriptionJanthitrem G, also known as antibiotic NLF-ii or permycin a, belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings. Based on a literature review a small amount of articles have been published on Janthitrem G.
Structure
Data?1563861999
Synonyms
ValueSource
9-L-Serinepolypeptin aHMDB
9-L-Serinepolypeptin a, 9ciHMDB
Antibiotic NLF-IIHMDB
NLF-IIHMDB
Permycin aHMDB
Polypeptin a, 9-L-serineHMDB
12-Hydroxy-8-(2-hydroxypropan-2-yl)-2,3,23,23,25,25-hexamethyl-7,24-dioxa-31-azaoctacyclo[15.14.0.0²,¹⁵.0³,¹².0⁶,¹¹.0¹⁸,³⁰.0²⁰,²⁸.0²²,²⁷]hentriaconta-1(17),10,18(30),19,26,28-hexaen-9-yl acetic acidHMDB
Chemical FormulaC39H51NO6
Average Molecular Weight629.8253
Monoisotopic Molecular Weight629.371638369
IUPAC Name12-hydroxy-8-(2-hydroxypropan-2-yl)-2,3,23,23,25,25-hexamethyl-7,24-dioxa-31-azaoctacyclo[15.14.0.0²,¹⁵.0³,¹².0⁶,¹¹.0¹⁸,³⁰.0²⁰,²⁸.0²²,²⁷]hentriaconta-1(17),10,18(30),19,26,28-hexaen-9-yl acetate
Traditional Name12-hydroxy-8-(2-hydroxypropan-2-yl)-2,3,23,23,25,25-hexamethyl-7,24-dioxa-31-azaoctacyclo[15.14.0.0²,¹⁵.0³,¹².0⁶,¹¹.0¹⁸,³⁰.0²⁰,²⁸.0²²,²⁷]hentriaconta-1(17),10,18(30),19,26,28-hexaen-9-yl acetate
CAS Registry Number90986-51-9
SMILES
CC(=O)OC1C=C2C(CCC3(C)C4(C)C(CC5=C4NC4=C5C=C5CC6C(=CC(C)(C)OC6(C)C)C5=C4)CCC23O)OC1C(C)(C)O
InChI Identifier
InChI=1S/C39H51NO6/c1-20(41)44-31-18-28-30(45-33(31)35(4,5)42)11-12-37(8)38(9)22(10-13-39(28,37)43)16-25-24-14-21-15-27-26(19-34(2,3)46-36(27,6)7)23(21)17-29(24)40-32(25)38/h14,17-19,22,27,30-31,33,40,42-43H,10-13,15-16H2,1-9H3
InChI KeyPGYSJEQVCATFBQ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassNaphthopyrans
Sub ClassNot Available
Direct ParentNaphthopyrans
Alternative Parents
Substituents
  • Naphthopyran
  • Naphthalene
  • 3-alkylindole
  • Indane
  • Indole
  • Indole or derivatives
  • Benzenoid
  • Pyran
  • Cyclic alcohol
  • Heteroaromatic compound
  • Tertiary alcohol
  • Pyrrole
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Dialkyl ether
  • Ether
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Azacycle
  • Organic oxide
  • Organopnictogen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Alcohol
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effect
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.00025 g/LALOGPS
logP6.16ALOGPS
logP5.12ChemAxon
logS-6.4ALOGPS
pKa (Strongest Acidic)13.61ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area101.01 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity178.79 m³·mol⁻¹ChemAxon
Polarizability74.83 ųChemAxon
Number of Rings8ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+243.06731661259
DarkChem[M-H]-237.12831661259
DeepCCS[M-2H]-284.41930932474
DeepCCS[M+Na]+259.00730932474
AllCCS[M+H]+245.832859911
AllCCS[M+H-H2O]+244.832859911
AllCCS[M+NH4]+246.732859911
AllCCS[M+Na]+247.032859911
AllCCS[M-H]-242.732859911
AllCCS[M+Na-2H]-246.732859911
AllCCS[M+HCOO]-251.232859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Janthitrem GCC(=O)OC1C=C2C(CCC3(C)C4(C)C(CC5=C4NC4=C5C=C5CC6C(=CC(C)(C)OC6(C)C)C5=C4)CCC23O)OC1C(C)(C)O5243.6Standard polar33892256
Janthitrem GCC(=O)OC1C=C2C(CCC3(C)C4(C)C(CC5=C4NC4=C5C=C5CC6C(=CC(C)(C)OC6(C)C)C5=C4)CCC23O)OC1C(C)(C)O4407.3Standard non polar33892256
Janthitrem GCC(=O)OC1C=C2C(CCC3(C)C4(C)C(CC5=C4NC4=C5C=C5CC6C(=CC(C)(C)OC6(C)C)C5=C4)CCC23O)OC1C(C)(C)O4854.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Janthitrem G,1TMS,isomer #1CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C)CCC2CC4=C([NH]C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O4801.3Semi standard non polar33892256
Janthitrem G,1TMS,isomer #2CC(=O)OC1C=C2C(CCC3(C)C2(O)CCC2CC4=C([NH]C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C4843.0Semi standard non polar33892256
Janthitrem G,1TMS,isomer #3CC(=O)OC1C=C2C(CCC3(C)C2(O)CCC2CC4=C(N([Si](C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O4870.0Semi standard non polar33892256
Janthitrem G,2TMS,isomer #1CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C)CCC2CC4=C([NH]C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C4727.1Semi standard non polar33892256
Janthitrem G,2TMS,isomer #2CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C)CCC2CC4=C(N([Si](C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O4737.5Semi standard non polar33892256
Janthitrem G,2TMS,isomer #3CC(=O)OC1C=C2C(CCC3(C)C2(O)CCC2CC4=C(N([Si](C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C4773.5Semi standard non polar33892256
Janthitrem G,3TMS,isomer #1CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C)CCC2CC4=C(N([Si](C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C4671.2Semi standard non polar33892256
Janthitrem G,3TMS,isomer #1CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C)CCC2CC4=C(N([Si](C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C4773.0Standard non polar33892256
Janthitrem G,1TBDMS,isomer #1CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C(C)(C)C)CCC2CC4=C([NH]C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O4996.1Semi standard non polar33892256
Janthitrem G,1TBDMS,isomer #2CC(=O)OC1C=C2C(CCC3(C)C2(O)CCC2CC4=C([NH]C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C(C)(C)C5050.2Semi standard non polar33892256
Janthitrem G,1TBDMS,isomer #3CC(=O)OC1C=C2C(CCC3(C)C2(O)CCC2CC4=C(N([Si](C)(C)C(C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O4997.2Semi standard non polar33892256
Janthitrem G,2TBDMS,isomer #1CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C(C)(C)C)CCC2CC4=C([NH]C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C(C)(C)C5121.8Semi standard non polar33892256
Janthitrem G,2TBDMS,isomer #2CC(=O)OC1C=C2C(CCC3(C)C2(O[Si](C)(C)C(C)(C)C)CCC2CC4=C(N([Si](C)(C)C(C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O5058.9Semi standard non polar33892256
Janthitrem G,2TBDMS,isomer #3CC(=O)OC1C=C2C(CCC3(C)C2(O)CCC2CC4=C(N([Si](C)(C)C(C)(C)C)C5=CC6=C(C=C45)CC4C6=CC(C)(C)OC4(C)C)C23C)OC1C(C)(C)O[Si](C)(C)C(C)(C)C5112.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (Non-derivatized) - 70eV, Positivesplash10-0c0u-6001396000-bcf00a7be951a3b83b972017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-10-17Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Janthitrem G GC-MS ("Janthitrem G,1TMS,#1" TMS) - 70eV, PositiveNot Available2021-11-02Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 10V, Positive-QTOFsplash10-03e9-1000198000-9cc3c3fc759d71bd01f52016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 20V, Positive-QTOFsplash10-00di-0000090000-5e79491898c50ee1f8c42016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 40V, Positive-QTOFsplash10-00xr-4002950000-df54d69583fda30f6b0d2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 10V, Negative-QTOFsplash10-004i-4000069000-768eacf04f771ce6d2282016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 20V, Negative-QTOFsplash10-07y0-5000194000-dc72c776c640d64a3ae72016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 40V, Negative-QTOFsplash10-0a4i-9100430000-2e7232a75660a05265122016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 10V, Negative-QTOFsplash10-05p9-2000093000-a7179a1ecad58edbd2b72021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 20V, Negative-QTOFsplash10-0a4i-9000000000-c01bbbf5bed889264ddb2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 40V, Negative-QTOFsplash10-0a6u-9100030000-e223a97f62dc5c33ddb72021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 10V, Positive-QTOFsplash10-001i-0000049000-8fb9d34d8d88788e364d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 20V, Positive-QTOFsplash10-001i-0002197000-dd28a8307b7420127a902021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Janthitrem G 40V, Positive-QTOFsplash10-0api-9045581000-ea143d166d2d9fdbc23e2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002404
KNApSAcK IDC00018214
Chemspider ID8569675
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound172928
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .