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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:27:25 UTC
Update Date2022-03-07 02:54:52 UTC
HMDB IDHMDB0036324
Secondary Accession Numbers
  • HMDB36324
Metabolite Identification
Common NameGlicoricone
DescriptionGlicoricone belongs to the class of organic compounds known as isoflavones. These are polycyclic compounds containing a 2-isoflavene skeleton which bears a ketone group at the C4 carbon atom. Glicoricone has been detected, but not quantified in, herbs and spices. This could make glicoricone a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Glicoricone.
Structure
Data?1563862857
Synonyms
ValueSource
2',4',7-Trihydroxy-6'-methoxy-3'-prenylisoflavoneHMDB
GlicoriconeMeSH
Chemical FormulaC21H20O6
Average Molecular Weight368.3799
Monoisotopic Molecular Weight368.125988372
IUPAC Name3-[4,6-dihydroxy-2-methoxy-3-(3-methylbut-2-en-1-yl)phenyl]-7-hydroxy-4H-chromen-4-one
Traditional Name3-[4,6-dihydroxy-2-methoxy-3-(3-methylbut-2-en-1-yl)phenyl]-7-hydroxychromen-4-one
CAS Registry Number161099-37-2
SMILES
COC1=C(CC=C(C)C)C(O)=CC(O)=C1C1=COC2=C(C=CC(O)=C2)C1=O
InChI Identifier
InChI=1S/C21H20O6/c1-11(2)4-6-13-16(23)9-17(24)19(21(13)26-3)15-10-27-18-8-12(22)5-7-14(18)20(15)25/h4-5,7-10,22-24H,6H2,1-3H3
InChI KeySSDIPYMSXRNGMZ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoflavones. These are polycyclic compounds containing a 2-isoflavene skeleton which bears a ketone group at the C4 carbon atom.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassIsoflav-2-enes
Direct ParentIsoflavones
Alternative Parents
Substituents
  • Isoflavone
  • Hydroxyisoflavonoid
  • Chromone
  • Methoxyphenol
  • Benzopyran
  • 1-benzopyran
  • Phenoxy compound
  • Anisole
  • Phenol ether
  • Resorcinol
  • Methoxybenzene
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Phenol
  • Pyranone
  • Monocyclic benzene moiety
  • Pyran
  • Benzenoid
  • Heteroaromatic compound
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point192 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility2.61 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.016 g/LALOGPS
logP3.75ALOGPS
logP4ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)6.46ChemAxon
pKa (Strongest Basic)-4.8ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area96.22 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity102.39 m³·mol⁻¹ChemAxon
Polarizability38.61 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+188.38231661259
DarkChem[M-H]-189.6631661259
DeepCCS[M+H]+189.00230932474
DeepCCS[M-H]-186.64430932474
DeepCCS[M-2H]-220.52530932474
DeepCCS[M+Na]+195.88430932474
AllCCS[M+H]+188.532859911
AllCCS[M+H-H2O]+185.432859911
AllCCS[M+NH4]+191.332859911
AllCCS[M+Na]+192.232859911
AllCCS[M-H]-187.532859911
AllCCS[M+Na-2H]-187.132859911
AllCCS[M+HCOO]-186.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
GlicoriconeCOC1=C(CC=C(C)C)C(O)=CC(O)=C1C1=COC2=C(C=CC(O)=C2)C1=O4792.2Standard polar33892256
GlicoriconeCOC1=C(CC=C(C)C)C(O)=CC(O)=C1C1=COC2=C(C=CC(O)=C2)C1=O3038.5Standard non polar33892256
GlicoriconeCOC1=C(CC=C(C)C)C(O)=CC(O)=C1C1=COC2=C(C=CC(O)=C2)C1=O3350.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Glicoricone,1TMS,isomer #1COC1=C(CC=C(C)C)C(O[Si](C)(C)C)=CC(O)=C1C1=COC2=CC(O)=CC=C2C1=O3197.3Semi standard non polar33892256
Glicoricone,1TMS,isomer #2COC1=C(CC=C(C)C)C(O)=CC(O[Si](C)(C)C)=C1C1=COC2=CC(O)=CC=C2C1=O3211.4Semi standard non polar33892256
Glicoricone,1TMS,isomer #3COC1=C(CC=C(C)C)C(O)=CC(O)=C1C1=COC2=CC(O[Si](C)(C)C)=CC=C2C1=O3193.9Semi standard non polar33892256
Glicoricone,2TMS,isomer #1COC1=C(CC=C(C)C)C(O[Si](C)(C)C)=CC(O[Si](C)(C)C)=C1C1=COC2=CC(O)=CC=C2C1=O3133.0Semi standard non polar33892256
Glicoricone,2TMS,isomer #2COC1=C(CC=C(C)C)C(O[Si](C)(C)C)=CC(O)=C1C1=COC2=CC(O[Si](C)(C)C)=CC=C2C1=O3110.5Semi standard non polar33892256
Glicoricone,2TMS,isomer #3COC1=C(CC=C(C)C)C(O)=CC(O[Si](C)(C)C)=C1C1=COC2=CC(O[Si](C)(C)C)=CC=C2C1=O3110.5Semi standard non polar33892256
Glicoricone,3TMS,isomer #1COC1=C(CC=C(C)C)C(O[Si](C)(C)C)=CC(O[Si](C)(C)C)=C1C1=COC2=CC(O[Si](C)(C)C)=CC=C2C1=O3085.2Semi standard non polar33892256
Glicoricone,1TBDMS,isomer #1COC1=C(CC=C(C)C)C(O[Si](C)(C)C(C)(C)C)=CC(O)=C1C1=COC2=CC(O)=CC=C2C1=O3456.6Semi standard non polar33892256
Glicoricone,1TBDMS,isomer #2COC1=C(CC=C(C)C)C(O)=CC(O[Si](C)(C)C(C)(C)C)=C1C1=COC2=CC(O)=CC=C2C1=O3464.7Semi standard non polar33892256
Glicoricone,1TBDMS,isomer #3COC1=C(CC=C(C)C)C(O)=CC(O)=C1C1=COC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C2C1=O3453.1Semi standard non polar33892256
Glicoricone,2TBDMS,isomer #1COC1=C(CC=C(C)C)C(O[Si](C)(C)C(C)(C)C)=CC(O[Si](C)(C)C(C)(C)C)=C1C1=COC2=CC(O)=CC=C2C1=O3576.4Semi standard non polar33892256
Glicoricone,2TBDMS,isomer #2COC1=C(CC=C(C)C)C(O[Si](C)(C)C(C)(C)C)=CC(O)=C1C1=COC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C2C1=O3574.8Semi standard non polar33892256
Glicoricone,2TBDMS,isomer #3COC1=C(CC=C(C)C)C(O)=CC(O[Si](C)(C)C(C)(C)C)=C1C1=COC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C2C1=O3578.4Semi standard non polar33892256
Glicoricone,3TBDMS,isomer #1COC1=C(CC=C(C)C)C(O[Si](C)(C)C(C)(C)C)=CC(O[Si](C)(C)C(C)(C)C)=C1C1=COC2=CC(O[Si](C)(C)C(C)(C)C)=CC=C2C1=O3691.1Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Glicoricone GC-MS (Non-derivatized) - 70eV, Positivesplash10-0f7c-1009000000-4192e14d745233a459e02017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Glicoricone GC-MS (3 TMS) - 70eV, Positivesplash10-01b9-1000090000-e1d36678bfcad74596a92017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Glicoricone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 10V, Positive-QTOFsplash10-014i-0009000000-700460d01741e2a757f92015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 20V, Positive-QTOFsplash10-02t9-2009000000-6633bae5f207796294712015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 40V, Positive-QTOFsplash10-0170-9855000000-9da86b73e16597647e5d2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 10V, Negative-QTOFsplash10-014i-0009000000-97616cdd6ebc123bd0bd2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 20V, Negative-QTOFsplash10-02t9-0419000000-e625537d12e8c80174102015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 40V, Negative-QTOFsplash10-03dr-1910000000-7fccc29cfd5df56070112015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 10V, Positive-QTOFsplash10-014i-0009000000-234ffe494e5be5441fb92021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 20V, Positive-QTOFsplash10-03di-0009000000-282fee1da13a46ebdc242021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 40V, Positive-QTOFsplash10-01c0-0396000000-3c68c8877906f9a96c332021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 10V, Negative-QTOFsplash10-014i-0009000000-53fb202c32e20191eab92021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 20V, Negative-QTOFsplash10-014r-0019000000-5310ef16c823d30c25282021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Glicoricone 40V, Negative-QTOFsplash10-0002-0193000000-c20be0ccf5847419be682021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015195
KNApSAcK IDC00053258
Chemspider ID8537107
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10361658
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1854591
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .