Showing Protein Protocadherin gamma-A1 (HMDBP07910)
Identification | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HMDB Protein ID | HMDBP07910 | |||||||||||||||
Secondary Accession Numbers |
|
|||||||||||||||
Name | Protocadherin gamma-A1 | |||||||||||||||
Synonyms |
|
|||||||||||||||
Gene Name | PCDHGA1 | |||||||||||||||
Protein Type | Unknown | |||||||||||||||
Biological Properties | ||||||||||||||||
General Function | Involved in calcium ion binding | |||||||||||||||
Specific Function | Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain | |||||||||||||||
Pathways | Not Available | |||||||||||||||
Reactions | Not Available | |||||||||||||||
GO Classification |
|
|||||||||||||||
Cellular Location |
|
|||||||||||||||
Gene Properties | ||||||||||||||||
Chromosome Location | Chromosome:5 | |||||||||||||||
Locus | 5q31 | |||||||||||||||
SNPs | PCDHGA1 | |||||||||||||||
Gene Sequence |
>2796 bp ATGAAGATTCAGAAAAAGCTGACTGGCTGCAGCAGGCTGATGCTTCTGTGTCTTTCTCTG GAGCTGCTGTTGGAAGCTGGGGCTGGGAATATTCACTACTCAGTGCCGGAAGAGACAGAC AAAGGTTCCTTCGTAGGCAACATCGCCAAGGACCTAGGGCTGCAACCCCAGGAGCTGGCA GATGGCGGAGTCCGCATCGTCTCCAGAGGTAGGATGCCGCTTTTCGCTCTGAATCCTAGA AGTGGCAGCTTGATCACCGCGCGCAGGATAGACCGGGAGGAGCTCTGCGCTCAGAGCATG CCGTGTCTCGTGAGTTTTAATATCCTTGTTGAGGATAAAATGAAGCTTTTTCCTGTTGAA GTAGAAATAATTGATATTAATGACAACACTCCCCAATTCCAGTTAGAGGAACTGGAGTTT AAAATGAATGAAATAACGACTCCAGGTACCAGAGTCTCATTGCCTTTTGGGCAAGACCTT GATGTGGGTATGAACTCACTCCAGAGCTACCAACTCAGCTCTAACCCTCATTTCTCCCTG GATGTGCAACAGGGAGCCGATGGGCCTCAACATCCAGAGATGGTGCTGCAGAGTCCCTTA GACAGAGAAGAAGAAGCTGTCCACCACCTCATCCTCACAGCTTCTGATGGGGGTGAACCA GTCCGTTCAGGGACCCTCAGAATTTACATTCAGGTGGTGGATGCAAATGACAATCCTCCA GCATTTACTCAGGCACAATACCATATAAATGTCCCCGAAAACGTGCCGCTGGGTACTCAG CTGCTCATGGTAAATGCCACTGACCCTGATGAGGGAGCCAATGGGGAAGTAACGTACTCC TTTCACAATGTAGACCACAGAGTGGCCCAAATATTTCGTTTAGATTCTTACACAGGAGAA ATATCAAATAAAGAACCACTAGATTTCGAAGAATACAAAATGTATTCAATGGAAGTTCAA GCCCAGGATGGTGCGGGGCTCATGGCTAAAGTTAAGGTACTGATCAAAGTTTTGGATGTA AATGATAATGCCCCAGAAGTGACCATCACCTCTGTCACCACTGCAGTTCCAGAAAACTTT CCTCCTGGGACCATAATTGCTCTTATCAGTGTGCATGACCAGGACTCAGGAGACAATGGC TACACCACATGTTTCATTCCTGGAAATTTACCCTTTAAATTGGAAAAGTTAGTTGATAAT TATTACCGTTTAGTGACTGAAAGAACACTGGACAGAGAACTTATCTCTGGGTACAACATC ACAATAACAGCAATAGACCAAGGAACTCCAGCTCTATCTACTGAAACTCACATTTCACTA CTAGTGACAGATATCAATGACAACTCCCCAGTCTTCCATCAGGACTCCTACTCTGCCTAC ATTCCCGAAAACAACCCCAGAGGAGCCTCCATCTTCTCTGTGAGGGCCCACGACTTGGAC AGCAATGAGAATGCACAAATCACTTACTCCCTAATAGAGGACACTATCCAGGGGGCACCC CTATCTGCCTACCTCTCCATCAACTCCGACACTGGGGTCCTGTATGCGCTGCGATCCTTC GACTATGAGCAGTTCCGGGACATGCAACTGAAAGTGATGGCGCGGGACAGTGGGGATCCG CCCCTCAGCAGCAACGTGTCTCTCAGCCTATTCCTGCTGGACCAGAACGACAACGCGCCC GAGATCCTGTACCCCGCCCTCCCCACAGATGGTTCTACCGGCGTGGAGCTGGCGCCCCTC TCCGCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAGAGACTCGGGCCAG AACGCCTGGCTGTCCTACCGCCTGCTCAAGGCCAGCGAGCCGGGACTCTTCTCGGTGGGT CTGCACACGGGCGAGGTGCGCACGGCGCGAGCCCTGCTGGACAGAGACGCGCTCAAGCAG AGTCTCGTGGTGGCCGTCCAGGACCACGGCCAGCCCCCGCTCTCCGCCACTGTCACGCTC ACCGTGGCCGTGGCCGACAGGATCTCCGACATCCTGGCCGACCTGGGCAGCCTCGAGCCC TCCGCCAAACCCAACGATTCGGACCTCACTCTGTACCTGGTGGTGGCGGCGGCCGCGGTC TCCTGCGTCTTCCTGGCCTTCGTCATCGTGCTGCTGGCGCACAGGCTGCGGCGCTGGCAC AAGTCACGTCTGCTACAGGCTTCGGGAGGCGGCTTAGCGAGCATGCCCGGTTCGCACTTT GTGGGCGTGGACGGGGTTCGGGCTTTCCTGCAGACCTATTCCCACGAGGTCTCCCTCACT GCGGACTCGCGGAAGAGCCACCTGATTTTCCCCCAGCCCAACTATGCGGACACACTCATC AGCCAGGAGAGCTGTGAGAAAAAGGGTTTTCTATCAGCACCCCAGTCTTTACTTGAAGAC AAAAAGGAACCATTTTCTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCC CAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAAC CAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGAT GGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCC CAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAAT GCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGC AACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA |
|||||||||||||||
Protein Properties | ||||||||||||||||
Number of Residues | 931 | |||||||||||||||
Molecular Weight | 101224.9 | |||||||||||||||
Theoretical pI | 4.64 | |||||||||||||||
Pfam Domain Function | ||||||||||||||||
Signals |
|
|||||||||||||||
Transmembrane Regions |
|
|||||||||||||||
Protein Sequence |
>Protocadherin gamma-A1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK |
|||||||||||||||
External Links | ||||||||||||||||
GenBank ID Protein | 5456924 | |||||||||||||||
UniProtKB/Swiss-Prot ID | Q9Y5H4 | |||||||||||||||
UniProtKB/Swiss-Prot Entry Name | PCDG1_HUMAN | |||||||||||||||
PDB IDs | Not Available | |||||||||||||||
GenBank Gene ID | AF152318 | |||||||||||||||
GeneCard ID | PCDHGA1 | |||||||||||||||
GenAtlas ID | PCDHGA1 | |||||||||||||||
HGNC ID | HGNC:8696 | |||||||||||||||
References | ||||||||||||||||
General References |
|