Hmdb loader
Survey
Identification
HMDB Protein ID HMDBP07916
Secondary Accession Numbers
  • 13627
Name Protocadherin gamma-A7
Synonyms
  1. PCDH-gamma-A7
Gene Name PCDHGA7
Protein Type Unknown
Biological Properties
General Function Involved in calcium ion binding
Specific Function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain
Pathways Not Available
Reactions Not Available
GO Classification
Component
membrane
cell part
plasma membrane
Function
ion binding
cation binding
metal ion binding
binding
calcium ion binding
Process
cell adhesion
cellular process
cell-cell adhesion
homophilic cell adhesion
Cellular Location
  1. Cell membrane
  2. Single-pass type I membrane protein
Gene Properties
Chromosome Location Chromosome:5
Locus 5q31
SNPs PCDHGA7
Gene Sequence
>2799 bp
ATGGCGGCTCAGCCGAGGGGCGGGGACTACAGAGGATTCTTCCTGCTCTCCATCCTCCTG
GGGACCCCCTGGGAAGCCTGGGCAGGACGTATTCTCTACTCCGTGTCGGAGGAGACGGAC
AAAGGGTCCTTTGTGGGAGACATCGCCAAGGACCTGGGGCTGGAGCCCCGGGAGCTGGCG
GAGCGCGGAGTCCGCATCATCTCCAGAGGTAGGACGCAGCTTTTCGCCCTGAACCAGCGC
AGCGGCAGCTTGGTCACTGCGGGCAGGATAGACCGGGAAGAGATCTGCGCTCAGAGTGCG
CGGTGTCTGGTAAACTTTAACATCCTGATGGAAGATAAAATGAATCTTTACCCTATAGAC
GTGGAAATAATAGATATTAATGACAACGTTCCAAGATTCTTGACGGAAGAAATAAATGTA
AAAATAATGGAGAATACAGCTCCTGGGGTTCGGTTTCCGTTAAGCGAGGCTGGGGATCCA
GATGTGGGCACGAACTCCCTCCAGAGTTACCAGCTCAGCCCCAATCGCCACTTCTCCCTG
GCTGTGCAAAGTGGAGACGATGAAACTAAGTACCCGGAACTGGTGCTGGAGCGGGTGCTG
GACCGGGAGGAAGAGCGGGTTCACCACCTGGTCCTCACAGCCTCTGATGGCGGCGACCCG
CCCCGATCCAGCACCGCCCACATCCAGGTGACAGTGGTGGATGTGAATGACCACACGCCT
GTCTTCTCTCTGCCTCAGTACCAAGTAACTGTCCCCGAGAATGTGCCAGTGGGTACAAGA
CTGCTCACGGTACATGCTATCGACCTGGACGAGGGAGTCAATGGGGAAGTGACATATTCT
TTTCGGAAAATAACTCCTAAACTTCCAAAGATGTTTCATCTGAACTCGCTTACAGGAGAA
ATATCAACTTTAGAAGGATTAGATTATGAAGAAACTGCCTTCTATGAAATGGAGGTTCAG
GCTCAAGATGGTCCTGGTAGTCTGACAAAGGCAAAAGTACTGATCACAGTTTTAGATGTA
AATGATAATGCTCCAGAAGTGACTATGACGTCTTTAAGTAGCTCAATCCCTGAAGACACA
CCTCTTGGGACAGTCATTGCTCTTTTCTACCTACAAGACAGAGATTCTGGAAAGAATGGT
GAGGTGACCTGCACCATTCCAGAAAACCTACCTTTTAAATTAGAAAAATCAATAGATAAT
TATTATAGATTGGTCACAACCAAAAACTTGGACCGGGAAACACTCTCTTTGTATAACATC
ACACTGAAAGCCACAGATGGTGGAACTCCTCCCTTGTCCAGGGAAACTCACATATTCATG
CAGGTGGCAGACACCAACGATAACCCACCCACCTTCCCCCACTCATCCTACTCAGTCTAC
ATCGCTGAGAACAACCCCAGAGGGGCCTCCATTTTCTTAGTGACTGCACAGGACCACGAC
AGTGAGGATAATGCCCAGATCACTTATTCCTTGGCCGAAGACACCATCCAGGGGGCTCCA
GTGTCCTCCTATGTCTCCATAAACTCTGACACTGGAGTCCTGTACGCGCTGCAATCCTTT
GATTATGAGCAGTTGAGAGAACTACAACTAAGAGTGACTGCACATGACAGCGGGGACCCG
CCTCTCAGCAGCAACATGTCACTGAGCCTGTTCGTGCTGGACCAGAATGACAACCCGCCC
GAGATCCTGTACCCGGCCCTCCCCACAGATGGTTCTACTGGCATGGAGCTGGCACCCCGC
TCCGCAGAGCCCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAAAGATTCAGGCCAG
AACGCCTGGCTGTCATACCTCCTGCTTAAGGCCAGCGAGCCAGGACTCTTTGCGGTTGGG
CTGTACACGGGCGAGGTGCGCACGGCTCGGGCCCTGCTGGACAGAGATGCCCTCAAGCAG
AGCCTCGTGGTGGCCGTCCAGGACCACGGTCAGCCTCCTCTGTCAGCCACCGTCACACTC
ACCGTGGCTGTGGCTGACAGCATCCCCGAAGTCTTGGCCGACCTGGGCAGCCTTGAGCCC
TCCGACGGTCCTTACAACTATGACCTCACGTTGTACCTGGTGGTGGCGGTGGCCACAGTC
TCCTGCGTCTTCCTAGCCTTCGTCCTCGTACTGCTGGCGCTCAGGCTGCGGCGCTGGCAC
AAGTCACGCCTGCTGCAGGCTTCAGAAGGTGGCTTGGCGAACGTGCCCACCTCGCACTTT
GTGGGCATGGACGGGGTGCAGGCTTTCCTGCAGACCTATTCCCATGAGGTCTCCCTCACC
GCGGACTCTCGGAAGAGTCACCTGATCTTCCCCCAGCCCAACTATGTAGACATGCTCATC
AGCCAGGAGAGCTGTGAGAAAAATGATTCTTTGCTAACATCCGTAGATTTTCAGGAATGT
AAAGAAAACCTGCCAAGTATTCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAG
GCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAAC
AACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCT
GATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGA
CCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGC
AATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAAT
GGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
Protein Properties
Number of Residues 932
Molecular Weight 101721.1
Theoretical pI 4.48
Pfam Domain Function
Signals
  • 1-28
Transmembrane Regions
  • 693-713
Protein Sequence
>Protocadherin gamma-A7
MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA
ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID
VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL
AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP
VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE
ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT
PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI
TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD
SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP
PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ
NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH
KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI
SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
GenBank ID Protein 5456948
UniProtKB/Swiss-Prot ID Q9Y5G6
UniProtKB/Swiss-Prot Entry Name PCDG7_HUMAN
PDB IDs Not Available
GenBank Gene ID AF152327
GeneCard ID PCDHGA7
GenAtlas ID PCDHGA7
HGNC ID HGNC:8705
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Wu Q, Maniatis T: A striking organization of a large family of human neural cadherin-like cell adhesion genes. Cell. 1999 Jun 11;97(6):779-90. [PubMed:10380929 ]