Hmdb loader
Identification
HMDB Protein ID HMDBP09069
Secondary Accession Numbers
  • 14811
Name Probable sodium-coupled neutral amino acid transporter 6
Synonyms
  1. N-system amino acid transporter 1
  2. NAT-1
  3. Na(+)-coupled neutral amino acid transporter 6
  4. Solute carrier family 38 member 6
Gene Name SLC38A6
Protein Type Unknown
Biological Properties
General Function Amino acid transport and metabolism
Specific Function Probable sodium-dependent amino acid/proton antiporter
Pathways Not Available
Reactions Not Available
GO Classification Not Available
Cellular Location
  1. Membrane
  2. Multi-pass membrane protein (Potential)
Gene Properties
Chromosome Location Chromosome:1
Locus 14q23.1
SNPs SLC38A6
Gene Sequence
>1371 bp
ATGGAGGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCTGGTATGTCTCTGTCCAGCAG
CCTGAAGAAGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAACGAACTTCACAGACAG
CGATCCCCAGGTGTTTCATTTGGTTTATCAGTGTTTAATTTGATGAATGCCATCATGGGA
AGTGGCATCCTTGGCTTAGCTTATGTTATGGCTAATACCGGTGTCTTTGGATTTAGCTTC
TTGCTGCTGACAGTTGCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTTAGTATGTGT
ATTCAGACAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGA
AAGTTGGTGGTGGCAGGCACCATAATAATTCAGAATATTGGAGCTATGTCATCTTATCTT
TTAATTATTAAAACAGAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGAGACTATAGT
AGATATTGGTATCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTC
CCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGGCTACACAAGTAGTTTATCATTTTTC
TTTATGATGTTCTTTGCTCTTGTGGTAATAATTAAAAAATGGTCCATCCCTTGTCCTCTG
ACATTAAATTATGTAGAGAAAGGCTTCCAGATTTCAAATGTTACAGATGATTGTAAGCCA
AAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATGCCTTACCAACCATGGCTTTTTCATTT
CTCTGCCATACCTCAATATTGCCCATATACTGTGAACTTCAAAGTCCTTCAAAGAAAAGA
ATGCAGAATGTTACCAATACAGCAATTGCTTTAAGTTTTCTCATTTATTTTATATCTGCA
CTCTTTGGGTACCTCACTTTTTATGACAAAGTGGAGTCAGAATTACTAAAAGGTTATAGT
AAATACTTATCACATGATGTTGTTGTCATGACTGTGAAGTTATGCATACTATTTGCTGTG
CTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAATGATGTTTTTC
TCCAATTTTCCATTCTCATGGATTCGCCATTTTTTGATCACTCTAGCACTCAATATTATC
ATCGTTTTACTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCC
AGTACATCAACATGTTTGATTTTTATATTCCCAGGACTATTTTATCTTAAACTTAGCAGA
GAGGATTTTCTGTCATGGAAAAAGCTTGGGGCATTCGTTTTGCTCATCTTTGGAATTTTG
GTTGGGAATTTTAGTTTAGCACTCATCATTTTTGATTGGATTAATAAATAA
Protein Properties
Number of Residues 456
Molecular Weight 50927.9
Theoretical pI 7.98
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • 42-62
  • 85-105
  • 111-131
  • 170-190
  • 191-211
  • 250-270
  • 288-308
  • 327-347
  • 371-391
  • 394-414
  • 431-451
Protein Sequence
>Probable sodium-coupled neutral amino acid transporter 6
MEASWGSFNAERGWYVSVQQPEEAEAEELSPLLSNELHRQRSPGVSFGLSVFNLMNAIMG
SGILGLAYVLANTGVFGFSFLLLTVALLASYSVHLLLSMCIQTAVTSYEDLGLFAFGLPG
KLVVAGTIIIQNIGAMSSYLLIIKTELPAAIAEFLTGDYSRYWYLDGQTLLIIICVGIVF
PLALLPKIGFLGYTSSLSFFFMMFFALVVIIKKWSIPCPLTLNYVEKGFQISNVTDDCKP
KLFHFSKESAYALPTMAFSFLCHTSILPIYCELQSPSKKRMQNVTNTAIALSFLIYFISA
LFGYLTFYDKVESELLKGYSKYLSHDVVVMTVKLCILFAVLLTVPLIHFPARKAVTMMFF
SNFPFSWIRHFLITLALNIIIVLLAIYVPDIRNVFGVVGASTSTCLIFIFPGLFYLKLSR
EDFLSWKKLGAFVLLIFGILVGNFSLALIIFDWINK
GenBank ID Protein 24181971
UniProtKB/Swiss-Prot ID Q8IZM9
UniProtKB/Swiss-Prot Entry Name S38A6_HUMAN
PDB IDs Not Available
GenBank Gene ID AF543422
GeneCard ID SLC38A6
GenAtlas ID SLC38A6
HGNC ID HGNC:19863
References
General References
  1. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]
  2. Heilig R, Eckenberg R, Petit JL, Fonknechten N, Da Silva C, Cattolico L, Levy M, Barbe V, de Berardinis V, Ureta-Vidal A, Pelletier E, Vico V, Anthouard V, Rowen L, Madan A, Qin S, Sun H, Du H, Pepin K, Artiguenave F, Robert C, Cruaud C, Bruls T, Jaillon O, Friedlander L, Samson G, Brottier P, Cure S, Segurens B, Aniere F, Samain S, Crespeau H, Abbasi N, Aiach N, Boscus D, Dickhoff R, Dors M, Dubois I, Friedman C, Gouyvenoux M, James R, Madan A, Mairey-Estrada B, Mangenot S, Martins N, Menard M, Oztas S, Ratcliffe A, Shaffer T, Trask B, Vacherie B, Bellemere C, Belser C, Besnard-Gonnet M, Bartol-Mavel D, Boutard M, Briez-Silla S, Combette S, Dufosse-Laurent V, Ferron C, Lechaplais C, Louesse C, Muselet D, Magdelenat G, Pateau E, Petit E, Sirvain-Trukniewicz P, Trybou A, Vega-Czarny N, Bataille E, Bluet E, Bordelais I, Dubois M, Dumont C, Guerin T, Haffray S, Hammadi R, Muanga J, Pellouin V, Robert D, Wunderle E, Gauguet G, Roy A, Sainte-Marthe L, Verdier J, Verdier-Discala C, Hillier L, Fulton L, McPherson J, Matsuda F, Wilson R, Scarpelli C, Gyapay G, Wincker P, Saurin W, Quetier F, Waterston R, Hood L, Weissenbach J: The DNA sequence and analysis of human chromosome 14. Nature. 2003 Feb 6;421(6923):601-7. Epub 2003 Jan 1. [PubMed:12508121 ]
  3. Mackenzie B, Erickson JD: Sodium-coupled neutral amino acid (System N/A) transporters of the SLC38 gene family. Pflugers Arch. 2004 Feb;447(5):784-95. Epub 2003 Jul 4. [PubMed:12845534 ]