Hmdb loader
Identification
HMDB Protein ID HMDBP11506
Secondary Accession Numbers
  • 17860
Name Ras-GEF domain-containing family member 1C
Synonyms Not Available
Gene Name RASGEF1C
Protein Type Unknown
Biological Properties
General Function Involved in guanyl-nucleotide exchange factor activity
Specific Function Guanine nucleotide exchange factor (GEF)
Pathways Not Available
Reactions Not Available
GO Classification
Component
cell part
intracellular
Function
enzyme regulator activity
nucleoside-triphosphatase regulator activity
gtpase regulator activity
guanyl-nucleotide exchange factor activity
Process
biological regulation
regulation of biological process
regulation of cellular process
signal transduction
intracellular signal transduction
small gtpase mediated signal transduction
regulation of cell communication
regulation of signal transduction
regulation of small gtpase mediated signal transduction
Cellular Location Not Available
Gene Properties
Chromosome Location Chromosome:5
Locus 5q35.3
SNPs RASGEF1C
Gene Sequence
>1401 bp
ATGCCACAGACGCTGAGTGCCTCCGACATGGTCACCCCAGGCAGCCTCAGCCCACCCCCC
ACCGAGCCCACAGATGGCGAACAGGCTGGGCAGCCCCTCCTGGATGGAGCGCCATCCTCA
GCCTCCCTGGAAACACTGATCCAGCACCTGGTGCCCACAGCCGACTACTACCCCGAGAAA
GCCTACATCTTCACCTTCCTGCTGAGCTCTCGCCTCTTCATCGAGCCCCGGGAGCTCCTG
GCCCGGGTCTGCCACCTGTGCATCGAGCAGCAGCAGCTGGACAAGCCGGTGCTGGACAAG
GCCCGGGTCCGGAAGTTCGGCCCCAAACTGCTGCAGCTGTTGGCCGAGTGGACCGAGACC
TTCCCAAGGGACTTCCAGGAGGAGTCGACTATCGGGCACCTTAAGGACGTCGTGGGCCGC
ATCGCCCCCTGTGACGAGGCATACCGGAAGAGGATGCATCAGCTCCTACAGGCTCTGCAC
CAGAAGCTGGCGGCTCTGCGCCAGGGGCCAGAAGGTCTGGTGGGTGCCGACAAGCCCATC
TCCTACAGGACCAAGCCACCAGCCTCCATCCACAGGGAGCTCCTTGGTGTCTGCAGCGAC
CCCTACACACTGGCCCAGCAGCTGACCCACGTGGAACTGGAGCGGCTGCGGCACATCGGG
CCTGAGGAGTTTGTCCAGGCCTTTGTGAACAAGGACCCTCTGGCCAGCACAAAGCCCTGC
TTCAGTGACAAGACCAGCAACCTGGAGGCTTATGTGAAATGGTTCAACAGGCTGTGCTAC
CTGGTGGCAACTGAGATCTGCATGCCAGCCAAGAAGAAGCAGAGGGCCCAGGTGATTGAG
TTCTTCATCGACGTGGCCCGCGAGTGCTTCAACATCGGCAACTTCAACTCCCTCATGGCC
ATCATCTCCGGCATGAACATGAGCCCTGTCTCCAGGCTGAAGAAGACCTGGGCCAAAGTG
AGGACGGCCAAGTTTTTCATCCTCGAGCACCAGATGGACCCAACGGGGAATTTCTGCAAC
TACAGGACAGCCCTGCGCGGGGCGGCCCACCGCTCCCTGACGGCCCACAGCAGCCGAGAG
AAGATTGTCATTCCTTTCTTCAGCCTGCTCATCAAAGACATCTACTTCCTGAATGAGGGC
TGCGCCAACCGCCTTCCCAATGGACACGTCAACTTTGAGAAATTCCTGGAGCTGGCCAAG
CAGGTGGGGGAGTTCATCACCTGGAAACAAGTGGAGTGTCCCTTCGAGCAAGACGCCAGC
ATCACCCACTACCTGTACACCGCCCCCATCTTCAGTGAGGATGGTCTTTATTTGGCTTCT
TATGAAAGTGAGAGCCCAGAGAACCAAACAGAAAAAGAAAGATGGAAAGCTCTAAGATCT
TCTATTTTGGGGAAGACATGA
Protein Properties
Number of Residues 466
Molecular Weight 52869.3
Theoretical pI 7.72
Pfam Domain Function
Signals
  • None
Transmembrane Regions
  • None
Protein Sequence
>Ras-GEF domain-containing family member 1C
MPQTLSASDMVTPGSLSPPPTEPTDGEQAGQPLLDGAPSSASLETLIQHLVPTADYYPEK
AYIFTFLLSSRLFIEPRELLARVCHLCIEQQQLDKPVLDKARVRKFGPKLLQLLAEWTET
FPRDFQEESTIGHLKDVVGRIAPCDEAYRKRMHQLLQALHQKLAALRQGPEGLVGADKPI
SYRTKPPASIHRELLGVCSDPYTLAQQLTHVELERLRHIGPEEFVQAFVNKDPLASTKPC
FSDKTSNLEAYVKWFNRLCYLVATEICMPAKKKQRAQVIEFFIDVARECFNIGNFNSLMA
IISGMNMSPVSRLKKTWAKVRTAKFFILEHQMDPTGNFCNYRTALRGAAHRSLTAHSSRE
KIVIPFFSLLIKDIYFLNEGCANRLPNGHVNFEKFLELAKQVGEFITWKQVECPFEQDAS
ITHYLYTAPIFSEDGLYLASYESESPENQTEKERWKALRSSILGKT
GenBank ID Protein 33187643
UniProtKB/Swiss-Prot ID Q8N431
UniProtKB/Swiss-Prot Entry Name RGF1C_HUMAN
PDB IDs Not Available
GenBank Gene ID AF449764
GeneCard ID RASGEF1C
GenAtlas ID RASGEF1C
HGNC ID HGNC:27400
References
General References
  1. Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S: Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet. 2004 Jan;36(1):40-5. Epub 2003 Dec 21. [PubMed:14702039 ]
  2. Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Genome Res. 2004 Oct;14(10B):2121-7. [PubMed:15489334 ]