Hmp_logo

Human Metabolome Database Version 3.5

HMDB has recently undergone some major changes, if you are experiencing problems please click here to provide us with feedback.

Showing metabocard for TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] (HMDB10536)

Record Information
Version 3.5
Creation Date 2008-09-22 14:02:01 -0600
Update Date 2013-02-08 17:25:08 -0700
HMDB ID HMDB10536
Secondary Accession Numbers None
Metabolite Identification
Common Name TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3]
Description TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] is a dieicosapentaenoic acid triglyceride. Triglycerides (TGs) are also known as triacylglycerols or triacylglycerides, meaning that they are glycerides in which the glycerol is esterified with three fatty acid groups (i.e. fatty acid tri-esters of glycerol). TGs may be divided into three general types with respect to their acyl substituents. They are simple or monoacid if they contain only one type of fatty acid, diacid if they contain two types of fatty acids and triacid if three different acyl groups. Chain lengths of the fatty acids in naturally occurring triglycerides can be of varying lengths and saturations but 16, 18 and 20 carbons are the most common. TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3], in particular, consists of one chain of eicosapentaenoic acid at the C-1 position, one chain of linoleic acid at the C-2 position and one chain of eicosapentaenoic acid at the C-3 position. TGs are the main constituent of vegetable oil and animal fats. TGs are major components of very low density lipoprotein (VLDL) and chylomicrons, play an important role in metabolism as energy sources and transporters of dietary fat. They contain more than twice the energy (9 kcal/g) of carbohydrates and proteins. In the intestine, triglycerides are split into glycerol and fatty acids (this process is called lipolysis) with the help of lipases and bile secretions, which can then move into blood vessels. The triglycerides are rebuilt in the blood from their fragments and become constituents of lipoproteins, which deliver the fatty acids to and from fat cells among other functions. Various tissues can release the free fatty acids and take them up as a source of energy. Fat cells can synthesize and store triglycerides. When the body requires fatty acids as an energy source, the hormone glucagon signals the breakdown of the triglycerides by hormone-sensitive lipase to release free fatty acids. As the brain cannot utilize fatty acids as an energy source, the glycerol component of triglycerides can be converted into glucose for brain fuel when it is broken down. (www.cyberlipid.org, www.wikipedia.org)TAGs can serve as fatty acid stores in all cells, but primarily in adipocytes of adipose tissue. The major building block for the synthesis of triacylglycerides, in non-adipose tissue, is glycerol. Adipocytes lack glycerol kinase and so must use another route to TAG synthesis. Specifically, dihydroxyacetone phosphate (DHAP), which is produced during glycolysis, is the precursor for TAG synthesis in adipose tissue. DHAP can also serve as a TAG precursor in non-adipose tissues, but does so to a much lesser extent than glycerol. The use of DHAP for the TAG backbone depends on whether the synthesis of the TAGs occurs in the mitochondria and ER or the ER and the peroxisomes. The ER/mitochondria pathway requires the action of glycerol-3-phosphate dehydrogenase to convert DHAP to glycerol-3-phosphate. Glycerol-3-phosphate acyltransferase then esterifies a fatty acid to glycerol-3-phosphate thereby generating lysophosphatidic acid. The ER/peroxisome reaction pathway uses the peroxisomal enzyme DHAP acyltransferase to acylate DHAP to acyl-DHAP which is then reduced by acyl-DHAP reductase. The fatty acids that are incorporated into TAGs are activated to acyl-CoAs through the action of acyl-CoA synthetases. Two molecules of acyl-CoA are esterified to glycerol-3-phosphate to yield 1,2-diacylglycerol phosphate (also known as phosphatidic acid). The phosphate is then removed by phosphatidic acid phosphatase (PAP1), to generate 1,2-diacylglycerol. This diacylglycerol serves as the substrate for addition of the third fatty acid to make TAG. Intestinal monoacylglycerols, derived from dietary fats, can also serve as substrates for the synthesis of 1,2-diacylglycerols.
Structure Thumb
Download: MOL | SDF | SMILES | InChI
Display: 2D Structure | 3D Structure
Synonyms
  1. 1-Eicosapentaenoyl-2-linoleoyl-3-eicosapentaenoyl-glycerol
  2. TAG(20:5/18:2/20:5)
  3. TAG(20:5n3/18:2n6/20:5n3)
  4. TAG(20:5w3/18:2w6/20:5w3)
  5. TAG(58:12)
  6. TG(20:5/18:2/20:5)
  7. TG(20:5n3/18:2n6/20:5n3)
  8. TG(20:5w3/18:2w6/20:5w3)
  9. TG(58:12)
  10. Tracylglycerol(20:5/18:2/20:5)
  11. Tracylglycerol(20:5n3/18:2n6/20:5n3)
  12. Tracylglycerol(20:5w3/18:2w6/20:5w3)
  13. Tracylglycerol(58:12)
  14. Triacylglycerol
  15. Triglyceride
Chemical Formula C61H94O6
Average Molecular Weight 923.3955
Monoisotopic Molecular Weight 922.70504074
IUPAC Name 3-[(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyloxy]-2-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propyl (5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoate
Traditional IUPAC Name 3-[(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyloxy]-2-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propyl (5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoate
CAS Registry Number Not Available
SMILES [H]C(COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)(COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)OC(=O)CCCCCCC\C=C/C\C=C/CCCCC
InChI Identifier InChI=1S/C61H94O6/c1-4-7-10-13-16-19-22-25-28-30-33-35-38-41-44-47-50-53-59(62)65-56-58(67-61(64)55-52-49-46-43-40-37-32-27-24-21-18-15-12-9-6-3)57-66-60(63)54-51-48-45-42-39-36-34-31-29-26-23-20-17-14-11-8-5-2/h7-8,10-11,16-21,25-29,32-36,41-42,44-45,58H,4-6,9,12-15,22-24,30-31,37-40,43,46-57H2,1-3H3/b10-7-,11-8-,19-16-,20-17-,21-18-,28-25-,29-26-,32-27-,35-33-,36-34-,44-41-,45-42-
InChI Key KKWBWRCIRQWSRS-SDOORCPXSA-N
Chemical Taxonomy
Kingdom Organic Compounds
Super Class Lipids
Class Glycerolipids
Sub Class Triacylglycerols
Other Descriptors
  • Aliphatic Acyclic Compounds
Substituents
  • Acyclic Alkene
  • Carboxylic Acid Ester
  • Fatty Acid Ester
  • Tricarboxylic Acid Derivative
Direct Parent Triacylglycerols
Ontology
Status Expected and Not Quantified
Origin
  • Endogenous
  • Food
Biofunction
  • Cell signaling
  • Energy source
  • Fuel and energy storage
  • Fuel or energy source
  • Membrane component
  • Membrane integrity/stability
Application
  • Nutrients
  • Stabilizers
  • Surfactants and Emulsifiers
Cellular locations
  • Extracellular
  • Membrane
Physical Properties
State Solid
Experimental Properties
Property Value Reference
Melting Point Not Available Not Available
Boiling Point Not Available Not Available
Water Solubility Not Available Not Available
LogP Not Available Not Available
Predicted Properties
Property Value Source
LogP 9.44 ALOGPS
LogP 19.03 ChemAxon
LogS -8.04 ALOGPS
pKa (strongest basic) -6.6 ChemAxon
Hydrogen Acceptor Count 3 ChemAxon
Hydrogen Donor Count 0 ChemAxon
Polar Surface Area 78.9 A2 ChemAxon
Rotatable Bond Count 48 ChemAxon
Refractivity 300.7 ChemAxon
Polarizability 112.75 ChemAxon
Formal Charge 0 ChemAxon
Physiological Charge 0 ChemAxon
Spectra
Not Available
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biofluid Locations Not Available
Tissue Location
  • All Tissues
Pathways Not Available
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Predicted Concentrations Help
Biofluid Value Original age Original sex Original condition Comments
Blood 0.001031552 +/- 0.000375629 uM Adult (>18 years old) Both Normal (Most Probable) Calculated using MetaboAnalyst
Blood 2.7 +/- 0.173205081 uM Adult (>18 years old) Both Normal (Upper Limit) Calculated using MetaboAnalyst
Associated Disorders and Diseases
Disease References None
Associated OMIM IDs None
DrugBank ID Not Available
Phenol Explorer Compound ID Not Available
Phenol Explorer Metabolite ID Not Available
FoodDB ID FDB027687
KNApSAcK ID Not Available
Chemspider ID 24768289 Link_out
KEGG Compound ID Not Available
BioCyc ID Not Available
BiGG ID Not Available
Wikipedia Link Not Available
NuGOwiki Link HMDB10536 Link_out
Metagene Link HMDB10536 Link_out
METLIN ID Not Available
PubChem Compound 53480578 Link_out
PDB ID Not Available
ChEBI ID Not Available
References
Synthesis Reference Not Available
Material Safety Data Sheet (MSDS) Not Available
General References Not Available

Enzymes
Name: Pancreatic triacylglycerol lipase
Reactions:
    Gene Name: PNLIP
    Uniprot ID: P16233 Link_out
    Protein Sequence: FASTA
    Gene Sequence: FASTA
    Name: Hepatic triacylglycerol lipase
    Reactions:
      Gene Name: LIPC
      Uniprot ID: P11150 Link_out
      Protein Sequence: FASTA
      Gene Sequence: FASTA
      Name: Pancreatic lipase-related protein 1
      Reactions:
        Gene Name: PNLIPRP1
        Uniprot ID: P54315 Link_out
        Protein Sequence: FASTA
        Gene Sequence: FASTA
        Name: Patatin-like phospholipase domain-containing protein 3
        Reactions:
          Gene Name: PNPLA3
          Uniprot ID: Q9NST1 Link_out
          Protein Sequence: FASTA
          Gene Sequence: FASTA
          Name: Gastric triacylglycerol lipase
          Reactions:
            Gene Name: LIPF
            Uniprot ID: P07098 Link_out
            Protein Sequence: FASTA
            Gene Sequence: FASTA
            Name: Endothelial lipase
            Reactions:
              Gene Name: LIPG
              Uniprot ID: Q9Y5X9 Link_out
              Protein Sequence: FASTA
              Gene Sequence: FASTA
              Name: Bile salt-activated lipase
              Reactions:
                Gene Name: CEL
                Uniprot ID: P19835 Link_out
                Protein Sequence: FASTA
                Gene Sequence: FASTA
                Name: Diacylglycerol O-acyltransferase 1
                Reactions:
                  Gene Name: DGAT1
                  Uniprot ID: O75907 Link_out
                  Protein Sequence: FASTA
                  Gene Sequence: FASTA
                  Name: Pancreatic lipase-related protein 2
                  Reactions:
                    Gene Name: PNLIPRP2
                    Uniprot ID: P54317 Link_out
                    Protein Sequence: FASTA
                    Gene Sequence: FASTA
                    Name: Lipoprotein lipase
                    Reactions:
                      Gene Name: LPL
                      Uniprot ID: P06858 Link_out
                      Protein Sequence: FASTA
                      Gene Sequence: FASTA
                      Name: Monoglyceride lipase
                      Reactions:
                        Gene Name: MGLL
                        Uniprot ID: Q99685 Link_out
                        Protein Sequence: FASTA
                        Gene Sequence: FASTA
                        Name: Liver carboxylesterase 1
                        Reactions:
                          Gene Name: CES1
                          Uniprot ID: P23141 Link_out
                          Protein Sequence: FASTA
                          Gene Sequence: FASTA
                          Name: Hormone-sensitive lipase
                          Reactions:
                            Gene Name: LIPE
                            Uniprot ID: Q05469 Link_out
                            Protein Sequence: FASTA
                            Gene Sequence: FASTA
                            Name: Protein disulfide-isomerase
                            Reactions:
                              Gene Name: P4HB
                              Uniprot ID: P07237 Link_out
                              Protein Sequence: FASTA
                              Gene Sequence: FASTA
                              Name: 2-acylglycerol O-acyltransferase 2
                              Reactions:
                                Gene Name: MOGAT2
                                Uniprot ID: Q3SYC2 Link_out
                                Protein Sequence: FASTA
                                Gene Sequence: FASTA
                                Name: Patatin-like phospholipase domain-containing protein 4
                                Reactions:
                                  Gene Name: PNPLA4
                                  Uniprot ID: P41247 Link_out
                                  Protein Sequence: FASTA
                                  Gene Sequence: FASTA
                                  Name: Diacylglycerol O-acyltransferase 2
                                  Reactions:
                                    Gene Name: DGAT2
                                    Uniprot ID: Q96PD7 Link_out
                                    Protein Sequence: FASTA
                                    Gene Sequence: FASTA
                                    Name: 2-acylglycerol O-acyltransferase 1
                                    Reactions:
                                      Gene Name: MOGAT1
                                      Uniprot ID: Q96PD6 Link_out
                                      Protein Sequence: FASTA
                                      Gene Sequence: FASTA
                                      Name: 2-acylglycerol O-acyltransferase 3
                                      Reactions:
                                        Gene Name: MOGAT3
                                        Uniprot ID: Q86VF5 Link_out
                                        Protein Sequence: FASTA
                                        Gene Sequence: FASTA
                                        Name: Phospholipase B1, membrane-associated
                                        Reactions:
                                          Gene Name: PLB1
                                          Uniprot ID: Q6P1J6 Link_out
                                          Protein Sequence: FASTA
                                          Gene Sequence: FASTA
                                          Name: Glycerol-3-phosphate acyltransferase 3
                                          Reactions:
                                            Gene Name: AGPAT9
                                            Uniprot ID: Q53EU6 Link_out
                                            Protein Sequence: FASTA
                                            Gene Sequence: FASTA
                                            Name: Patatin-like phospholipase domain-containing protein 2
                                            Reactions:
                                              Gene Name: PNPLA2
                                              Uniprot ID: Q96AD5 Link_out
                                              Protein Sequence: FASTA
                                              Gene Sequence: FASTA
                                              Name: Pancreatic lipase-related protein 3
                                              Reactions:
                                                Gene Name: PNLIPRP3
                                                Uniprot ID: Q17RR3 Link_out
                                                Protein Sequence: FASTA
                                                Gene Sequence: FASTA
                                                Name: Perilipin-4
                                                Reactions:
                                                  Gene Name: PLIN4
                                                  Uniprot ID: Q96Q06 Link_out
                                                  Protein Sequence: FASTA
                                                  Gene Sequence: FASTA
                                                  Name: Apolipoprotein C-II
                                                  Reactions:
                                                    Gene Name: APOC2
                                                    Uniprot ID: P02655 Link_out
                                                    Protein Sequence: FASTA
                                                    Gene Sequence: FASTA
                                                    Transporters
                                                    Name: Microsomal triglyceride transfer protein large subunit
                                                    Reactions:
                                                      Gene Name: MTTP
                                                      Uniprot ID: P55157 Link_out
                                                      Protein Sequence: FASTA
                                                      Gene Sequence: FASTA